CFinderM000347's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Pantothenate_and_CoA_biosynthesis0.000148309KEGG
Valine,_leucine_and_isoleucine_degradation0.001823088KEGG
CMGC_CDK-CRK7-CDK9 (from iTAK)0.002841085GFam
pantothenate kinase activity,0.00546875GO:0004594
coenzyme A biosynthetic process,0.006014497GO:0015937
Propanoate_metabolism0.014543734KEGG
beta-Alanine_metabolism0.014543734KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000018G0710ATP-dependent caseinolytic (Clp) protease/crotonase family proteinAT1G06550 (2.00E-143)
PH01000303G05404-phospho-panto-thenoylcysteine synthetaseAT1G12350 (1.60E-51)
PH01001710G0310NOP56-like pre RNA processing ribonucleoproteinAT3G05060 (8.00E-140)
PH01003011G0140SNF7 family proteinAT2G06530 (3.40E-57)
PH01003093G0170pantothenate kinase 2AT4G32180 (0.00E+00)
PH01003093G0180pantothenate kinase 2AT4G32180 (2.00E-61)
PH01003093G0200Uncharacterised conserved protein (UCP030210)AT2G17340 (6.10E-17)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000790RLK-Pelle_LRR-VIII-1 (from iTAK)
CMGC_CDK-CRK7-CDK9 (from iTAK)
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
details
CFinderM000816CMGC_CDK-CRK7-CDK9 (from iTAK)
details
CFinderM000966TKL-Pl-1 (from iTAK)
CMGC_CDK-CRK7-CDK9 (from iTAK)
protein phosphorylation,
chloride transport,
CAMK_CAMKL-CHK1 (from iTAK)
transferase activity, transferring phosphorus-containing groups,
voltage-gated chloride channel activity,
protein kinase activity,
ion channel activity,
ATP binding,
details
CFinderM000974CMGC_CDKL-Os (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
Glycerolipid_metabolism
details
CFinderM001019protein transport,
details
CFinderM001070GTnc GlycosylTransferases
checkpoint_clamp_complex
cell_cycle_checkpoint
DNA_damage_checkpoint
cullin-RING ubiquitin ligase complex,
details
CFinderM001086Pantothenate_and_CoA_biosynthesis
tRNA processing,
methyltransferase activity,
details
CFinderM001256checkpoint_clamp_complex
CK1_CK1-Pl (from iTAK)
Nicotinate_and_nicotinamide_metabolism
cell_cycle_checkpoint
DNA_damage_checkpoint
NAD+ synthase (glutamine-hydrolyzing) activity,
NAD biosynthetic process,
details
CFinderM001469FAR1 Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
RNA_degradation
membrane,
details

4.Expression profilings