CFinderM001143's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
endoplasmic reticulum membrane,0.004119137GO:0005789
protein N-linked glycosylation via asparagine,0.006186436GO:0018279
Valine,_leucine_and_isoleucine_degradation0.010985176KEGG
Benzoate_degradation0.019216547KEGG
Various_types_of_N-glycan_biosynthesis0.037418479KEGG
Biosynthesis_of_unsaturated_fatty_acids0.037418479KEGG
alpha-Linolenic_acid_metabolism0.037418479KEGG
Fatty_acid_metabolism0.037418479KEGG
N-Glycan_biosynthesis0.039085899KEGG
response to stress,0.040495742GO:0006950

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000031G2350P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT5G63120 (0.00E+00)
PH01000360G0740RING/FYVE/PHD-type zinc finger family proteinAT3G43230 (3.00E-163)
PH01000513G0620Adenine nucleotide alpha hydrolases-like superfamily proteinAT1G68300 (1.30E-35)
PH01001141G0110dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family proteinAT5G66680 (2.00E-167)
PH01001580G0120peroxisomal 3-ketoacyl-CoA thiolase 3AT2G33150 (0.00E+00)
PH01003100G0030Transducin/WD40 repeat-like superfamily proteinAT3G53390 (1.00E-141)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000404Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
Peroxisome
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
details
CFinderM000427AGC-Pl (from iTAK)
GT37 GlycosylTransferases
membrane,
Others Transcription_Regulator(from iTAK)
cell wall biogenesis,
phosphorylation,
details
CFinderM001128Galactose_metabolism
Porphyrin_and_chlorophyll_metabolism
details
CFinderM001130protein N-linked glycosylation via asparagine,
endoplasmic reticulum membrane,
WNK_NRBP (from iTAK)
HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-HD-ZIP Transcription_Regulator(from iTAK)
Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
Synthesis_and_degradation_of_ketone_bodies
Propanoate_metabolism
Butanoate_metabolism
Tryptophan_metabolism
Carbon_fixation_pathways_in_prokaryotes
Various_types_of_N-glycan_biosynthesis
Lysine_degradation
Fatty_acid_metabolism
Glyoxylate_and_dicarboxylate_metabolism
N-Glycan_biosynthesis
Terpenoid_backbone_biosynthesis
details
CFinderM001324Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
metabolic process,
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
details
CFinderM001325galactose metabolic process,
UDP-glucose 4-epimerase activity,
cellular metabolic process,
RNA_degradation
Amino_sugar_and_nucleotide_sugar_metabolism
Galactose_metabolism
details
CFinderM001363GT20 GlycosylTransferases
mitochondrial inner membrane,
Porphyrin_and_chlorophyll_metabolism
Starch_and_sucrose_metabolism
details
CFinderM001380Valine,_leucine_and_isoleucine_degradation
RLK-Pelle_LRR-XIV (from iTAK)
Benzoate_degradation
GRAS Transcription_Regulator(from PlantTFDB)
Fatty_acid_metabolism
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Peroxisome
details

4.Expression profilings