CFinderM001324's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Valine,_leucine_and_isoleucine_degradation0.009075425KEGG
Benzoate_degradation0.015873309KEGG
metabolic process,0.02272514GO:0008152
Biosynthesis_of_unsaturated_fatty_acids0.037050872KEGG
Fatty_acid_metabolism0.037050872KEGG
alpha-Linolenic_acid_metabolism0.037050872KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000360G0740RING/FYVE/PHD-type zinc finger family proteinAT3G43230 (3.00E-163)
PH01000611G0090-AT2G25670 (2.80E-21)
PH01000716G0450UDP-Glycosyltransferase superfamily proteinAT3G02100 (1.60E-97)
PH01000732G0370protein kinase family protein / WD-40 repeat family proteinAT4G29380 (0.00E+00)
PH01000892G0250-AT2G20562 (1.70E-09)
PH01001366G0270-- (-)
PH01001580G0120peroxisomal 3-ketoacyl-CoA thiolase 3AT2G33150 (0.00E+00)
PH01001716G0170Topoisomerase II-associated protein PAT1AT4G14990 (7.00E-168)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000404Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
Peroxisome
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
details
CFinderM000530RLK-Pelle_LRR-XIV (from iTAK)
transmembrane transport,
GRAS Transcription_Regulator(from PlantTFDB)
details
CFinderM001128Galactose_metabolism
Porphyrin_and_chlorophyll_metabolism
details
CFinderM001143endoplasmic reticulum membrane,
protein N-linked glycosylation via asparagine,
Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
Various_types_of_N-glycan_biosynthesis
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
N-Glycan_biosynthesis
response to stress,
details
CFinderM001269regulation of translational initiation,
'de novo' IMP biosynthetic process,
autophagy,
phosphoribosylformylglycinamidine cyclo-ligase activity,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
ribosome binding,
details
CFinderM001325galactose metabolic process,
UDP-glucose 4-epimerase activity,
cellular metabolic process,
RNA_degradation
Amino_sugar_and_nucleotide_sugar_metabolism
Galactose_metabolism
details
CFinderM001363GT20 GlycosylTransferases
mitochondrial inner membrane,
Porphyrin_and_chlorophyll_metabolism
Starch_and_sucrose_metabolism
details
CFinderM001380Valine,_leucine_and_isoleucine_degradation
RLK-Pelle_LRR-XIV (from iTAK)
Benzoate_degradation
GRAS Transcription_Regulator(from PlantTFDB)
Fatty_acid_metabolism
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Peroxisome
details

4.Expression profilings