CFinderM001336's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Golgi-associated vesicle,0.004124935GO:0005798
membrane coat,0.011659951GO:0030117
COPI vesicle coat,0.011659951GO:0030126
Homologous_recombination0.015128044KEGG
Terpenoid_backbone_biosynthesis0.015128044KEGG
isoprenoid biosynthetic process,0.043183407GO:0008299
binding,0.048176861GO:0005488

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000062G0580DEAD/DEAH box RNA helicase family protein AT2G01440 (0.00E+00)
PH01000598G0290CLIP-associated proteinAT2G20190 (0.00E+00)
PH01001302G0470transcription activatorsAT2G35110 (0.00E+00)
PH01001441G0020Glycosyltransferase family 61 proteinAT3G18180 (8.80E-40)
PH01002613G0290coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeAT4G34450 (0.00E+00)
PH01003543G0110geranylgeranyl reductaseAT4G38460 (4.10E-78)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001343Golgi-associated vesicle,
binding,
Terpenoid_backbone_biosynthesis
guanyl-nucleotide exchange factor activity,
COPI vesicle coat,
membrane coat,
details
CFinderM001371guanyl-nucleotide exchange factor activity,
small GTPase mediated signal transduction,
microtubule associated complex,
binding,
microtubule-based movement,
details
CFinderM001541Terpenoid_backbone_biosynthesis
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
terpenoid biosynthetic process,
iron-sulfur cluster assembly,
details
CFinderM001566DBP Transcription_Regulator(from iTAK)
helicase activity,
ATP-dependent 3'-5' DNA helicase activity,
Homologous_recombination
DNA recombination,
iron-sulfur cluster assembly,
protein dephosphorylation,
DNA repair,
DNA_replication
details
CFinderM001710membrane,
CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
hydrolase activity, acting on glycosyl bonds,
hydrogen-translocating pyrophosphatase activity,
transporter activity,
inorganic diphosphatase activity,
proton transport,
transport,
isoprenoid biosynthetic process,
Terpenoid_backbone_biosynthesis
Oxidative_phosphorylation
details
CFinderM001893Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
details

4.Expression profilings