|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | membrane, | 0.001174775 | GO:0016020 | | CBM22 Carbohydrate-Binding_Modules | 0.00168721 | GFam | | GH10 Glycoside_Hydrolases | 0.00168721 | GFam | | hydrolase activity, acting on glycosyl bonds, | 0.011935166 | GO:0016798 | | hydrogen-translocating pyrophosphatase activity, | 0.011935166 | GO:0009678 | | transporter activity, | 0.011935166 | GO:0005215 | | inorganic diphosphatase activity, | 0.015824677 | GO:0004427 | | proton transport, | 0.018720426 | GO:0015992 | | transport, | 0.018720426 | GO:0006810 | | isoprenoid biosynthetic process, | 0.021809802 | GO:0008299 | | Terpenoid_backbone_biosynthesis | 0.029140045 | KEGG | | Oxidative_phosphorylation | 0.035928121 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000578G0340 | - | AT1G35220 (0.00E+00) | | PH01000723G0500 | peptide transporter 2 | AT2G02040 (6.30E-83) | | PH01000723G0520 | Major facilitator superfamily protein | AT1G62200 (1.80E-40) | | PH01001440G0020 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | AT1G10050 (0.00E+00) | | PH01002007G0050 | Inorganic H pyrophosphatase family protein | AT1G16780 (0.00E+00) | | PH01003543G0110 | geranylgeranyl reductase | AT4G38460 (4.10E-78) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000263 | Spliceosome
HRT-like Transcription_Regulator(from PlantTFDB)
HRT Transcription_Regulator(from iTAK)
nucleotide binding,
nucleic acid binding,
serine-type endopeptidase activity,
| details | | CFinderM000719 | NAK (from iTAK)
Glycerophospholipid_metabolism
| details | | CFinderM001150 | CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
nucleosome,
| details | | CFinderM001193 | HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
hydrolase activity, acting on glycosyl bonds,
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
integral to membrane,
| details | | CFinderM001336 | Golgi-associated vesicle,
membrane coat,
COPI vesicle coat,
Homologous_recombination
Terpenoid_backbone_biosynthesis
isoprenoid biosynthetic process,
binding,
| details | | CFinderM001343 | Golgi-associated vesicle,
binding,
Terpenoid_backbone_biosynthesis
guanyl-nucleotide exchange factor activity,
COPI vesicle coat,
membrane coat,
| details | | CFinderM001418 | membrane,
proton transport,
Ether_lipid_metabolism
inorganic diphosphatase activity,
hydrogen-translocating pyrophosphatase activity,
Glycerophospholipid_metabolism
Oxidative_phosphorylation
| details | | CFinderM001430 | HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
hydrolase activity, acting on glycosyl bonds,
| details | | CFinderM001541 | Terpenoid_backbone_biosynthesis
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
terpenoid biosynthetic process,
iron-sulfur cluster assembly,
| details | | CFinderM001651 | clathrin adaptor complex,
COPI vesicle coat,
retrograde vesicle-mediated transport, Golgi to ER,
inorganic diphosphatase activity,
hydrogen-translocating pyrophosphatase activity,
Ether_lipid_metabolism
proton transport,
Glycerophospholipid_metabolism
| details | | CFinderM001688 | CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
CMGC_MAPK (from iTAK)
| details | | CFinderM001817 | GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
| details | | CFinderM001829 | retrograde transport, endosome to Golgi,
proton transport,
hydrogen-translocating pyrophosphatase activity,
inorganic diphosphatase activity,
Ether_lipid_metabolism
WRKY Transcription_Regulator(from PlantTFDB)
Glycerophospholipid_metabolism
Oxidative_phosphorylation
| details | | CFinderM001893 | Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
| details |
4.Expression profilings |
