CFinderM001499's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Glutathione_metabolism0.015836709KEGG
metallopeptidase activity,0.021099569GO:0008237
ionotropic glutamate receptor activity,0.021099569GO:0004970
extracellular-glutamate-gated ion channel activity,0.021099569GO:0005234
outer membrane-bounded periplasmic space,0.025738575GO:0030288

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000096G0020zinc finger (Ran-binding) family proteinAT1G55040 (8.90E-92)
PH01000486G0200glutamate receptor 2.8AT2G29110 (6.60E-88)
PH01000781G0730RNA-binding CRS1 / YhbY (CRM) domain proteinAT2G28480 (3.70E-85)
PH01001196G0070autophagy 9 (APG9)AT2G31260 (0.00E+00)
PH01001349G0080Pentatricopeptide repeat (PPR) superfamily proteinAT1G03100 (0.00E+00)
PH01001487G0040Peptidase M1 family proteinAT1G63770 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000884Protein_processing_in_endoplasmic_reticulum
GT48 GlycosylTransferases
HB-other Transcription_Regulator(from PlantTFDB)
HD-ZIP Transcription_Regulator(from PlantTFDB)
Nucleotide_excision_repair
proteasomal ubiquitin-dependent protein catabolic process,
outer membrane-bounded periplasmic space,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
nucleotide-excision repair,
details
CFinderM001087peroxiredoxin activity,
antioxidant activity,
Glutathione_metabolism
metallopeptidase activity,
details
CFinderM001378IMP biosynthetic process,
purine ribonucleoside monophosphate biosynthetic process,
thiolester_hydrolase_activity
AMP deaminase activity,
deaminase activity,
regulation of ARF GTPase activity,
ARF GTPase activator activity,
Fatty_acid_biosynthesis
Purine_metabolism
fatty acid biosynthetic process,
zinc ion binding,
details
CFinderM001388Protein_processing_in_endoplasmic_reticulum
GT48 GlycosylTransferases
Nucleotide_excision_repair
outer membrane-bounded periplasmic space,
1,3-beta-D-glucan synthase complex,
proteasomal ubiquitin-dependent protein catabolic process,
(1->3)-beta-D-glucan biosynthetic process,
nucleotide-excision repair,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
glycerol ether metabolic process,
details
CFinderM001389outer membrane-bounded periplasmic space,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001436STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
details
CFinderM001457mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
details
CFinderM001458mRNA_surveillance_pathway
AGC_RSK-2 (from iTAK)
SBP Transcription_Regulator(from PlantTFDB)
cell death,
details

4.Expression profilings