CFinderM001617's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Golgi organization,0.006249902GO:0007030
mRNA_surveillance_pathway0.021928485KEGG
solute:hydrogen antiporter activity,0.028820447GO:0015299
integral to membrane,0.030769994GO:0016021

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000019G2080signal peptide peptidaseAT2G03120 (1.00E-140)
PH01000581G0690-AT1G27595 (1.00E-164)
PH01001381G0470K+ efflux antiporter 4AT2G19600 (7.30E-88)
PH01001400G0110stomatal cytokinesis defective / SCD1 protein (SCD1)AT1G49040 (0.00E+00)
PH01002084G0040-AT4G24840 (3.00E-121)
PH01003722G0110Root hair defective 3 GTP-binding protein (RHD3)AT3G13870 (5.00E-122)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000972solute:hydrogen antiporter activity,
GT31 GlycosylTransferases
cation transport,
rRNA methyltransferase activity,
magnesium_ion_transport
rRNA processing,
transmembrane transport,
magnesium_ion_transmembrane_transporter_activity
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001034STE_STE20-YSK (from iTAK)
protein phosphatase type 2A complex,
glycolipid_6-alpha-mannosyltransferase_activity
GDP-Man:Man1GlcNAc2-PP-Dol_alpha-1,3-mannosyltransferase_activity
C3H Transcription_Regulator(from PlantTFDB)
details
CFinderM001112protein phosphatase type 2A complex,
GDP-Man:Man1GlcNAc2-PP-Dol_alpha-1,3-mannosyltransferase_activity
glycolipid_6-alpha-mannosyltransferase_activity
C3H Transcription_Regulator(from PlantTFDB)
protein phosphatase type 2A regulator activity,
mRNA_surveillance_pathway
Proteasome
protein catabolic process,
details
CFinderM001608pyruvate dehydrogenase complex,
dihydrolipoyllysine-residue acetyltransferase activity,
pyruvate metabolic process,
protein processing,
small-subunit processome,
integral to membrane,
transferase activity, transferring acyl groups,
mRNA_surveillance_pathway
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
Citrate_cycle_(TCA_cycle)
details
CFinderM001616intra-Golgi vesicle-mediated transport,
Golgi organization,
Golgi_transport_complex
mRNA_surveillance_pathway
details

4.Expression profilings