|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | pyruvate dehydrogenase complex, | 0.00206279 | GO:0045254 | | dihydrolipoyllysine-residue acetyltransferase activity, | 0.003125439 | GO:0004742 | | pyruvate metabolic process, | 0.004123646 | GO:0006090 | | protein processing, | 0.004123646 | GO:0016485 | | small-subunit processome, | 0.006183536 | GO:0032040 | | integral to membrane, | 0.018803885 | GO:0016021 | | transferase activity, transferring acyl groups, | 0.040472285 | GO:0016746 | | mRNA_surveillance_pathway | 0.045684344 | KEGG | | Pyruvate_metabolism | 0.045684344 | KEGG | | Glycolysis_/_Gluconeogenesis | 0.045684344 | KEGG | | Citrate_cycle_(TCA_cycle) | 0.045684344 | KEGG |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000305 | small-subunit processome,
regulation of ARF GTPase activity,
GT2 GlycosylTransferases
Starch_and_sucrose_metabolism
Endocytosis
| details | | CFinderM000421 | pyruvate dehydrogenase complex,
cellular modified amino acid biosynthetic process,
glutathione biosynthetic process,
pyruvate metabolic process,
dihydrolipoyllysine-residue acetyltransferase activity,
glutamate-cysteine ligase activity,
glycogen_phosphorylase_activity
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
Pyruvate_metabolism
Glutathione_metabolism
transferase activity, transferring acyl groups,
metabolic process,
| details | | CFinderM000614 | protein processing,
ATP biosynthetic process,
ATP_catabolic_process
plant-type cell wall organization,
GH28 Glycoside_Hydrolases
extracellular region,
integral to membrane,
Phosphatidylinositol_signaling_system
Oxidative_phosphorylation
| details | | CFinderM001034 | STE_STE20-YSK (from iTAK)
protein phosphatase type 2A complex,
glycolipid_6-alpha-mannosyltransferase_activity
GDP-Man:Man1GlcNAc2-PP-Dol_alpha-1,3-mannosyltransferase_activity
C3H Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001294 | small-subunit processome,
DNA integration,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM001422 | Glycine,_serine_and_threonine_metabolism
small-subunit processome,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
clathrin adaptor complex,
| details | | CFinderM001616 | intra-Golgi vesicle-mediated transport,
Golgi organization,
Golgi_transport_complex
mRNA_surveillance_pathway
| details | | CFinderM001617 | Golgi organization,
mRNA_surveillance_pathway
solute:hydrogen antiporter activity,
integral to membrane,
| details | | CFinderM001634 | Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
transferase activity, transferring acyl groups,
pyruvate dehydrogenase complex,
dihydrolipoyllysine-residue acetyltransferase activity,
metabolic process,
pyruvate metabolic process,
small-subunit processome,
| details | | CFinderM001686 | Oxidative_phosphorylation
GTnc GlycosylTransferases
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
small-subunit processome,
proton-transporting V-type ATPase, V1 domain,
proton-transporting two-sector ATPase complex, catalytic domain,
ATP synthesis coupled proton transport,
ATP metabolic process,
proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
| details |
4.Expression profilings |
