CFinderM001619's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LysM (from iTAK)0.018880861GFam
Trihelix Transcription_Regulator(from PlantTFDB)0.021318253GFam
Mo-molybdopterin cofactor biosynthetic process,0.030169136GO:0006777
molybdopterin cofactor biosynthetic process,0.030169136GO:0032324
SOS_response0.030169136GO:0009432
5-amino-6-(5-phosphoribosylamino)uracil reductase activity,0.037184532GO:0008703
riboflavin biosynthetic process,0.042686228GO:0009231
Endocytosis0.049275044KEGG
Homologous_recombination0.049275044KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000036G1140ENTH/VHS family proteinAT2G43160 (2.00E-148)
PH01000039G0390recA DNA recombination family proteinAT1G79050 (7.00E-172)
PH01000057G0840molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)AT5G20990 (7.20E-52)
PH01000063G1190chitin elicitor receptor kinase 1AT3G21630 (1.10E-47)
PH01000190G1350ENTH/VHS/GAT family proteinAT4G32760 (4.00E-130)
PH01000265G1050aspartate/glutamate/uridylate kinase family proteinAT3G10030 (4.00E-108)
PH01000812G0490ENTH/VHS/GAT family proteinAT4G32760 (3.20E-47)
PH01000994G0020SMAD/FHA domain-containing protein AT3G07220 (2.10E-79)
PH01001377G0110cytidine/deoxycytidylate deaminase family proteinAT3G47390 (8.00E-105)
PH01001406G0370DEA(D/H)-box RNA helicase family proteinAT1G59990 (9.00E-133)
PH01002718G0260RING/U-box superfamily proteinAT2G14835 (2.00E-104)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001154clathrin_coat
RLK-Pelle_LysM (from iTAK)
clathrin_coat_assembly
Trihelix Transcription_Regulator(from PlantTFDB)
cellular amino acid biosynthetic process,
RLK-Pelle_SD-2b (from iTAK)
clathrin_binding
1-phosphatidylinositol_binding
details
CFinderM001477BES1 Transcription_Regulator(from PlantTFDB)
Trihelix Transcription_Regulator(from PlantTFDB)
beta-amylase activity,
binding,
cellular amino acid biosynthetic process,
polysaccharide catabolic process,
details
CFinderM001795SOS_response
Homologous_recombination
SNARE_interactions_in_vesicular_transport
DNA metabolic process,
details

4.Expression profilings


Show details about module gene expression profiling