|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Aminoacyl-tRNA_biosynthesis | 5.16E-05 | KEGG | | tRNA aminoacylation for protein translation, | 0.00080356 | GO:0006418 | | aminoacyl-tRNA ligase activity, | 0.003779285 | GO:0004812 | | cytoplasm, | 0.006327435 | GO:0005737 | | threonyl-tRNA aminoacylation, | 0.006420771 | GO:0006435 | | ATP binding, | 0.01138029 | GO:0005524 | | tyrosine-tRNA ligase activity, | 0.01138029 | GO:0004831 | | threonine-tRNA ligase activity, | 0.012800825 | GO:0004829 | | tRNA aminoacylation, | 0.017809014 | GO:0043039 | | protein catabolic process, | 0.019217211 | GO:0030163 | | ATP-dependent peptidase activity, | 0.02047172 | GO:0004176 | | ligase activity, forming aminoacyl-tRNA and related compounds, | 0.024158561 | GO:0016876 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000016G1580 | Exostosin family protein | AT1G27440 (0.00E+00) | | PH01000056G1110 | DEA(D/H)-box RNA helicase family protein | AT5G60990 (1.00E-162) | | PH01000078G0200 | RING/U-box superfamily protein | AT5G15790 (1.20E-32) | | PH01000462G0330 | Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial | AT2G33840 (2.00E-120) | | PH01000876G0250 | lon protease 4 | AT3G05790 (3.00E-139) | | PH01003599G0040 | Threonyl-tRNA synthetase | AT5G26830 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000433 | Ribosome_biogenesis_in_eukaryotes
ATP-dependent helicase activity,
threonine-tRNA ligase activity,
helicase activity,
| details | | CFinderM000797 | threonyl-tRNA aminoacylation,
tRNA aminoacylation,
microtubule cytoskeleton organization,
cytokinesis
Aminoacyl-tRNA_biosynthesis
Ribosome_biogenesis_in_eukaryotes
threonine-tRNA ligase activity,
cellular amino acid metabolic process,
tRNA aminoacylation for protein translation,
ligase activity, forming aminoacyl-tRNA and related compounds,
microtubule binding,
| details | | CFinderM001471 | regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
WRKY Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001684 | heme_a_biosynthetic_process
peroxisomal membrane,
mitochondrial outer membrane,
protein_import_into_peroxisome_matrix
negative_regulation_of_transcription,_DNA-templated
transcription_corepressor_activity
| details | | CFinderM001698 | Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
| details | | CFinderM001744 | Ribosome_biogenesis_in_eukaryotes
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
threonine-tRNA ligase activity,
tRNA aminoacylation,
tRNA aminoacylation for protein translation,
cellular protein metabolic process,
RNA processing,
ligase activity, forming aminoacyl-tRNA and related compounds,
| details |
4.Expression profilings |
