CFinderM001627's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SET Transcription_Regulator(from iTAK)0.009341217GFam
intracellular protein transport,0.015708158GO:0006886
SNARE_interactions_in_vesicular_transport0.016840486KEGG
mRNA_surveillance_pathway0.032892728KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000519G0390-- (-)
PH01000783G0230Vesicle transport v-SNARE family proteinAT5G39510 (2.70E-80)
PH01000856G0080-AT1G57765 (4.70E-24)
PH01001114G0220SET domain group 40AT5G17240 (6.00E-117)
PH01001424G0270RAB GTPase homolog A2CAT3G46830 (5.00E-102)
PH01001936G0180CLP-similar protein 3AT3G04680 (6.00E-123)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000591HB-other Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
WASH_complex
actin cytoskeleton,
spliceosomal complex,
pre-mRNA_intronic_binding
details
CFinderM000804cysteine synthase activity,
chorismate mutase activity,
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
SET Transcription_Regulator(from iTAK)
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
chorismate metabolic process,
SNARE_interactions_in_vesicular_transport
Sulfur_metabolism
Cysteine_and_methionine_metabolism
details
CFinderM001444nucleolus,
SNARE_interactions_in_vesicular_transport
Homologous_recombination
SOS_response
DNA metabolic process,
ribosome biogenesis,
single-stranded DNA binding,
DNA-dependent ATPase activity,
details
CFinderM001549SNARE_interactions_in_vesicular_transport
vesicle-mediated transport,
intracellular protein transport,
SNAP receptor activity,
structural molecule activity,
details
CFinderM001584details
CFinderM001629mRNA_surveillance_pathway
peptide-methionine-(S)-S-oxide reductase activity,
details

4.Expression profilings