CFinderM001716's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Amino_sugar_and_nucleotide_sugar_metabolism0.000839723KEGG
cellular metabolic process,0.00147768GO:0044237
GT8 GlycosylTransferases0.003745256GFam
coenzyme binding,0.00554302GO:0050662
copper ion transport,0.011708498GO:0006825
copper-transporting_ATPase_activity0.026241592GO:0043682
Starch_and_sucrose_metabolism0.049969137KEGG
Ubiquitin_mediated_proteolysis0.049969137KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000003G3770ubiquitin-conjugating enzyme 25AT3G15355 (6.00E-82)
PH01000123G0830copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)AT5G44790 (0.00E+00)
PH01000622G0410UDP-D-apiose/UDP-D-xylose synthase 2AT1G08200 (0.00E+00)
PH01002027G0390Nucleotide-diphospho-sugar transferases superfamily proteinAT3G25140 (0.00E+00)
PH01002436G0250Nucleotide-diphospho-sugar transferases superfamily proteinAT5G03760 (0.00E+00)
PH01004140G0130UDP-D-apiose/UDP-D-xylose synthase 2AT1G08200 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000695STE_STE11 (from iTAK)
RLK-Pelle_RLCK-VIIa-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
details
CFinderM001227RLK-Pelle_RLCK-VIIa-1 (from iTAK)
Ubiquitin_mediated_proteolysis
Amino_sugar_and_nucleotide_sugar_metabolism
Galactose_metabolism
galactose metabolic process,
details
CFinderM001504Amino_sugar_and_nucleotide_sugar_metabolism
GT8 GlycosylTransferases
DNA metabolic process,
cellular metabolic process,
Nucleotide_excision_repair
Starch_and_sucrose_metabolism
details
CFinderM001781RLK-Pelle_LRR-XV (from iTAK)
RNA_degradation
copper ion transport,
C3H Transcription_Regulator(from PlantTFDB)
copper-transporting_ATPase_activity
protein binding,
details

4.Expression profilings