CFinderM001781's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LRR-XV (from iTAK)0.006186436GFam
RNA_degradation0.020270217KEGG
copper ion transport,0.023416995GO:0006825
C3H Transcription_Regulator(from PlantTFDB)0.024618466GFam
copper-transporting_ATPase_activity0.03838063GO:0043682
protein binding,0.03838063GO:0005515

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000123G0830copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)AT5G44790 (0.00E+00)
PH01000674G0720Fibronectin type III domain-containing proteinAT3G24440 (1.00E-114)
PH01000716G0350receptor-like protein kinase 2AT3G02130 (0.00E+00)
PH01000840G0410zinc finger (CCCH-type/C3HC4-type RING finger) family proteinAT3G08505 (1.00E-128)
PH01001235G0180RNA binding (RRM/RBD/RNP motifs) family proteinAT5G60170 (2.00E-108)
PH01004502G0120Galactose oxidase/kelch repeat superfamily proteinAT1G22040 (4.00E-153)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000967TKL-Pl-1 (from iTAK)
GH17 Glycoside_Hydrolases
phosphate-containing compound metabolic process,
phospholipid transport,
magnesium ion binding,
details
CFinderM001108RLK-Pelle_LRR-XV (from iTAK)
GT77 GlycosylTransferases
C3H Transcription_Regulator(from PlantTFDB)
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
details
CFinderM001227RLK-Pelle_RLCK-VIIa-1 (from iTAK)
Ubiquitin_mediated_proteolysis
Amino_sugar_and_nucleotide_sugar_metabolism
Galactose_metabolism
galactose metabolic process,
details
CFinderM001469FAR1 Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
RNA_degradation
membrane,
details
CFinderM001529Fanconi_anaemia_nuclear_complex
DNA repair,
Ubiquitin_mediated_proteolysis
details
CFinderM001568FAR1 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-XV (from iTAK)
details
CFinderM001597Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
C3H Transcription_Regulator(from PlantTFDB)
membrane,
details
CFinderM001657Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
phosphatidylinositol metabolic process,
Phagosome
cellular protein metabolic process,
phosphatidylinositol phosphate kinase activity,
aspartic-type endopeptidase activity,
GH35 Glycoside_Hydrolases
phospholipid transport,
proteolysis,
metal ion binding,
details
CFinderM001708Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
details
CFinderM001716Amino_sugar_and_nucleotide_sugar_metabolism
cellular metabolic process,
GT8 GlycosylTransferases
coenzyme binding,
copper ion transport,
copper-transporting_ATPase_activity
Starch_and_sucrose_metabolism
Ubiquitin_mediated_proteolysis
details
CFinderM001783RLK-Pelle_LRR-XV (from iTAK)
RNA_degradation
zinc ion binding,
details
CFinderM001801GH17 Glycoside_Hydrolases
phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
RNA_degradation
Arginine_and_proline_metabolism
Phagosome
details
CFinderM001808protein binding,
Peroxisome
RNA_degradation
Endocytosis
details

4.Expression profilings