|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | nucleotide-sugar transport, | 0.007811767 | GO:0015780 | | carbohydrate transport, | 0.008588916 | GO:0008643 | | nucleotide-sugar transmembrane transporter activity, | 0.017014029 | GO:0005338 | | Golgi membrane, | 0.01957049 | GO:0000139 | | sugar:hydrogen symporter activity, | 0.020405669 | GO:0005351 | | metallopeptidase activity, | 0.026051509 | GO:0008237 | | NAC Transcription_Regulator(from PlantTFDB) | 0.035100806 | GFam | | metalloendopeptidase activity, | 0.039851967 | GO:0004222 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000021G0720 | NAC domain containing protein 53 | AT3G10500 (3.40E-65) | | PH01000229G1200 | Zincin-like metalloproteases family protein | AT1G67690 (1.00E-165) | | PH01000516G0090 | vaculolar sorting receptor 3 | AT2G14740 (0.00E+00) | | PH01001158G0600 | ubiquitin-conjugating enzyme 34 | AT1G17280 (3.60E-80) | | PH01001201G0480 | Integral membrane Yip1 family protein | AT2G18840 (9.90E-99) | | PH01001613G0320 | Nucleotide-sugar transporter family protein | AT4G35335 (1.00E-147) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000108 | CMGC_CDK-CRK7-CDK9 (from iTAK)
Peroxisome
myosin complex,
microtubule associated complex,
| details | | CFinderM000186 | acid-amino acid ligase activity,
| details | | CFinderM000331 | | details | | CFinderM000952 | glucose-1-phosphate adenylyltransferase activity,
vesicle docking involved in exocytosis,
glycogen biosynthetic process,
| details | | CFinderM001365 | HSF Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
GT47 GlycosylTransferases
| details | | CFinderM001483 | eukaryotic translation initiation factor 3 complex,
cytoplasm,
valyl-tRNA aminoacylation,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
G-protein coupled receptor signaling pathway,
Aminoacyl-tRNA_biosynthesis
| details | | CFinderM001624 | nuclear pore,
ribonucleoside_binding
NAC Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase activity,
DNA-directed RNA polymerase activity,
| details | | CFinderM001734 | NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001755 | STE_STE7 (from iTAK)
nucleotide-sugar transport,
S-adenosylmethionine_biosynthetic_process
carbohydrate transport,
| details | | CFinderM001791 | valyl-tRNA aminoacylation,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
tRNA aminoacylation for protein translation,
| details | | CFinderM001889 | GT66 GlycosylTransferases
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
oligosaccharyl transferase activity,
ATP_catabolic_process
ATP biosynthetic process,
ATP metabolic process,
proton transport,
Protein_processing_in_endoplasmic_reticulum
protein glycosylation,
| details |
4.Expression profilings |
