|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000160G0960 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | AT1G65920 (1.40E-32) | | PH01000252G0970 | - | - (-) | | PH01000297G0230 | Transducin/WD40 repeat-like superfamily protein | AT5G14530 (3.00E-113) | | PH01001158G0600 | ubiquitin-conjugating enzyme 34 | AT1G17280 (3.60E-80) | | PH01001222G0200 | long chain acyl-CoA synthetase 9 | AT1G77590 (0.00E+00) | | PH01007419G0040 | squalene synthase 1 | AT4G34640 (3.40E-46) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000186 | acid-amino acid ligase activity,
| details | | CFinderM000840 | vesicle docking involved in exocytosis,
RNA modification,
pseudouridine synthesis,
translational initiation,
RNA_transport
pseudouridine synthase activity,
translation initiation factor activity,
vesicle-mediated transport,
| details | | CFinderM000868 | proteasome_regulatory_particle
Peroxisome
Proteasome
Fatty_acid_metabolism
| details | | CFinderM000952 | glucose-1-phosphate adenylyltransferase activity,
vesicle docking involved in exocytosis,
glycogen biosynthetic process,
| details | | CFinderM001220 | vesicle docking involved in exocytosis,
Peroxisome
Fatty_acid_metabolism
| details | | CFinderM001224 | regulation of Rab GTPase activity,
microtubule-based movement,
| details | | CFinderM001696 | phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
| details | | CFinderM001733 | nucleotide-sugar transport,
carbohydrate transport,
nucleotide-sugar transmembrane transporter activity,
Golgi membrane,
sugar:hydrogen symporter activity,
metallopeptidase activity,
NAC Transcription_Regulator(from PlantTFDB)
metalloendopeptidase activity,
| details | | CFinderM001736 | Oxidative_phosphorylation
proton-transporting V-type ATPase, V1 domain,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
proton-transporting two-sector ATPase complex, catalytic domain,
clathrin adaptor complex,
Phagosome
ATP metabolic process,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
transferase activity, transferring alkyl or aryl (other than methyl) groups,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
| details |
4.Expression profilings |
