CFinderM001850's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
lipid metabolic process,0.044538703GO:0006629

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000118G0230Phosphoenolpyruvate carboxylase family proteinAT2G43180 (7.00E-139)
PH01000836G0720-AT4G31570 (0.00E+00)
PH01000900G0260Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3AT4G16070 (2.00E-140)
PH01001563G0360PIN domain-like family proteinAT2G34570 (6.10E-56)
PH01002101G0330TRF-like 6AT1G72650 (2.90E-68)
PH01002852G0080-AT1G24460 (2.00E-172)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000069Ribosome_biogenesis_in_eukaryotes
Ino80_complex
ATP-dependent_5'-3'_DNA_helicase_activity
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
rRNA methyltransferase activity,
rRNA (adenine) methyltransferase activity,
snoRNA binding,
snRNA_pseudouridine_synthesis
rRNA modification,
details
CFinderM000196SCY1_SCYL2 (from iTAK)
phosphatidylinositol phosphorylation,
ubiquitin ligase complex,
protein ubiquitination,
binding,
details
CFinderM000204CMGC_CLK (from iTAK)
histone deacetylation,
ubiquitin ligase complex,
histone deacetylase activity,
details
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM000457SCY1_SCYL2 (from iTAK)
details
CFinderM000463exosome_(RNase_complex)
RNA_degradation
details
CFinderM000470SCY1_SCYL2 (from iTAK)
details
CFinderM000692CMGC_CLK (from iTAK)
ornithine_metabolic_process
histone deacetylation,
ornithine carbamoyltransferase activity,
carboxyl- or carbamoyltransferase activity,
histone deacetylase activity,
Arginine_and_proline_metabolism
cellular amino acid metabolic process,
details
CFinderM000696snRNA_pseudouridine_synthesis
snoRNA binding,
ribosome biogenesis,
MYB_related Transcription_Regulator(from PlantTFDB)
details
CFinderM001085details
CFinderM001251NAK (from iTAK)
magnesium_ion_transport
magnesium_ion_transmembrane_transporter_activity
triglyceride lipase activity,
lipid metabolic process,
glycopeptide_alpha-N-acetylgalactosaminidase_activity
membrane,
details
CFinderM001493ARID Transcription_Regulator(from iTAK)
magnesium_ion_transport
magnesium_ion_transmembrane_transporter_activity
details
CFinderM001722GTP_catabolic_process
small GTPase mediated signal transduction,
protein transport,
signal transduction,
GTPase activity,
GTP binding,
large ribosomal subunit,
intracellular,
membrane,
nucleocytoplasmic transport,
details
CFinderM001851katanin_complex
microtubule_severing
exocyst,
exocytosis,
microtubule binding,
triglyceride lipase activity,
details
CFinderM001875histone deacetylation,
histone deacetylase activity,
DNA_replication
Mismatch_repair
Nucleotide_excision_repair
DNA_replication
details

4.Expression profilings