Coexpression Network

Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE010183

Gene:
Yellow--query gene Green--co-expressed genes Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage
Complete white stage/Juvenile bud stage
Silver flowering stage/Juvenile bud stage
Gold flowering stage/Juvenile bud stage
Complete white stage/Third green stage
Silver flowering stage/Third green stage
Gold flowering stage/Third green stage
Silver flowering stage/Complete white stage
Gold flowering stage/Complete white stage
Gold flowering stage/Silver flowering stage

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)

Co-expressed genes of GWHGAAZE010183

Co-expression relationship

ID	Ortholog in Arabidopsis	Annotation	PCC	Relationship
GWHGAAZE010183	ATCG00490.1	ribulose-bisphosphate carboxylases	1	positive
GWHGAAZE010213	ATCG00490.1	ribulose-bisphosphate carboxylases	0.99	positive
GWHGAAZE010126	ATCG00490.1	ribulose-bisphosphate carboxylases	0.98	positive
GWHGAAZE010097	ATCG00720.1	photosynthetic electron transfer B	0.94	positive
GWHGAAZE033638	ATCG00720.1	photosynthetic electron transfer B	0.94	positive
GWHGAAZE010177	ATCG00680.1	photosystem II reaction center protein B	0.93	positive
GWHGAAZE010133	ATCG00680.1	photosystem II reaction center protein B	0.92	positive
GWHGAAZE010176	ATCG00720.1	photosynthetic electron transfer B	0.92	positive
GWHGAAZE010152	ATCG00120.1	ATP synthase subunit alpha	0.9	positive
GWHGAAZE010147	ATCG00340.1	Photosystem I, PsaA/PsaB protein	0.9	positive
GWHGAAZE010121	ATCG00350.1	Photosystem I, PsaA/PsaB protein	0.9	positive
GWHGAAZE010202	ATCG00130.1	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	0.89	positive
GWHGAAZE010187	ATCG00350.1	Photosystem I, PsaA/PsaB protein	0.89	positive
GWHGAAZE010188	ATCG00340.1	Photosystem I, PsaA/PsaB protein	0.89	positive
GWHGAAZE010208	ATCG00350.1	Photosystem I, PsaA/PsaB protein	0.89	positive
GWHGAAZE010146	ATCG00350.1	Photosystem I, PsaA/PsaB protein	0.88	positive
GWHGAAZE010155	ATCG00860.1	Chloroplast Ycf2;ATPase, AAA type, core	0.88	positive
GWHGAAZE010169	ATCG00860.1	Chloroplast Ycf2;ATPase, AAA type, core	0.88	positive
GWHGAAZE010201	ATCG00120.1	ATP synthase subunit alpha	0.88	positive
GWHGAAZE010113	ATCG00120.1	ATP synthase subunit alpha	0.87	positive
GWHGAAZE010120	ATCG00280.1	photosystem II reaction center protein C	0.87	positive
GWHGAAZE010115	ATCG00120.1	ATP synthase subunit alpha	0.86	positive
GWHGAAZE010105	ATCG00680.1	photosystem II reaction center protein B	0.86	positive
GWHGAAZE010212	ATCG00480.1	ATP synthase subunit beta	0.86	positive
GWHGAAZE010151	ATCG00150.1	ATPase, F0 complex, subunit A protein	0.86	positive
GWHGAAZE010124	ATCG00430.1	photosystem II reaction center protein G	0.86	positive

Expression profiling, GSEA and motif analysis