Coexpression Network

Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE025309

Gene:
Yellow--query gene Green--co-expressed genes Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage
Complete white stage/Juvenile bud stage
Silver flowering stage/Juvenile bud stage
Gold flowering stage/Juvenile bud stage
Complete white stage/Third green stage
Silver flowering stage/Third green stage
Gold flowering stage/Third green stage
Silver flowering stage/Complete white stage
Gold flowering stage/Complete white stage
Gold flowering stage/Silver flowering stage

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)

Co-expressed genes of GWHGAAZE025309

Co-expression relationship

ID	Ortholog in Arabidopsis	Annotation	PCC	Relationship
GWHGAAZE025309	AT1G10630.1	ADP-ribosylation factor A1F	1	positive
GWHGAAZE010113	ATCG00120.1	ATP synthase subunit alpha	-0.68	negative
GWHGAAZE010202	ATCG00130.1	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	-0.66	negative
GWHGAAZE010126	ATCG00490.1	ribulose-bisphosphate carboxylases	-0.65	negative
GWHGAAZE010213	ATCG00490.1	ribulose-bisphosphate carboxylases	-0.64	negative
GWHGAAZE010152	ATCG00120.1	ATP synthase subunit alpha	-0.63	negative
GWHGAAZE010114	ATCG00120.1	ATP synthase subunit alpha	-0.63	negative
GWHGAAZE010201	ATCG00120.1	ATP synthase subunit alpha	-0.62	negative
GWHGAAZE010188	ATCG00340.1	Photosystem I, PsaA/PsaB protein	-0.62	negative
GWHGAAZE010146	ATCG00350.1	Photosystem I, PsaA/PsaB protein	-0.61	negative
GWHGAAZE010187	ATCG00350.1	Photosystem I, PsaA/PsaB protein	-0.61	negative
GWHGAAZE010183	ATCG00490.1	ribulose-bisphosphate carboxylases	-0.61	negative
GWHGAAZE010147	ATCG00340.1	Photosystem I, PsaA/PsaB protein	-0.6	negative
GWHGAAZE010095	ATCG00670.1	plastid-encoded CLP P	-0.6	negative
GWHGAAZE010208	ATCG00350.1	Photosystem I, PsaA/PsaB protein	-0.6	negative
GWHGAAZE010121	ATCG00350.1	Photosystem I, PsaA/PsaB protein	-0.6	negative
GWHGAAZE010106	ATCG00670.1	plastid-encoded CLP P	-0.59	negative
GWHGAAZE010186	ATCG00360.1	Tetratricopeptide repeat (TPR)-like superfamily protein	-0.57	negative
GWHGAAZE010174	ATCG00740.1	RNA polymerase subunit alpha	-0.57	negative
GWHGAAZE010195	AT4G27010.1	ribosome 60S biogenesis amino-terminal protein;(source:Araport11)	-0.57	negative
GWHGAAZE010204	ATCG00180.1	DNA-directed RNA polymerase family protein	-0.57	negative
GWHGAAZE010132	ATCG00670.1	plastid-encoded CLP P	-0.57	negative
GWHGAAZE010192	ATCG00180.1	DNA-directed RNA polymerase family protein	-0.56	negative
GWHGAAZE010178	ATCG00670.1	plastid-encoded CLP P	-0.56	negative
GWHGAAZE010150	ATCG00170.1	DNA-directed RNA polymerase family protein	-0.56	negative

Expression profiling, GSEA and motif analysis