|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Oxidative_phosphorylation | 0.000243159 | KEGG | | mitochondrial intermembrane space, | 0.004124935 | GO:0005758 | | protein import into mitochondrial inner membrane, | 0.004281852 | GO:0045039 | | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), | 0.004638739 | GO:0000276 | | copper chaperone activity, | 0.00535106 | GO:0016531 | | ubiquinol-cytochrome-c reductase activity, | 0.00535106 | GO:0008121 | | mitochondrial electron transport, ubiquinol to cytochrome c, | 0.00855969 | GO:0006122 | | copper ion transport, | 0.010693761 | GO:0006825 | | ATP synthesis coupled proton transport, | 0.014947887 | GO:0015986 | | ribosome biogenesis, | 0.014947887 | GO:0042254 | | hydrogen ion transmembrane transporter activity, | 0.022783073 | GO:0015078 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000040G1370 | DNA-binding enhancer protein-related | AT3G06610 (1.40E-27) | | PH01000732G0040 | cytochrome c oxidase 17 | AT3G15352 (3.20E-24) | | PH01000804G0180 | Tim10/DDP family zinc finger protein | AT2G29530 (1.60E-26) | | PH01000991G0530 | Ribosomal protein L10 family protein | AT1G25260 (1.00E-63) | | PH01002412G0260 | ATP synthase D chain, mitochondrial | AT3G52300 (1.20E-70) | | PH01002524G0200 | Ubiquinol-cytochrome C reductase hinge protein | AT1G15120 (3.00E-22) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM001018 | mitochondrial intermembrane space,
CMGC_CK2 (from iTAK)
mitochondrial electron transport, ubiquinol to cytochrome c,
copper ion transport,
ubiquinol-cytochrome-c reductase activity,
copper chaperone activity,
RNA-dependent DNA replication,
Oxidative_phosphorylation
Ribosome_biogenesis_in_eukaryotes
| details | | CFinderM001030 | protein import into mitochondrial inner membrane,
RLK-Pelle_L-LEC (from iTAK)
protein methylation,
| details | | CFinderM001031 | intracellular,
translation,
structural constituent of ribosome,
protein import into mitochondrial inner membrane,
Ribosome
RLK-Pelle_L-LEC (from iTAK)
large ribosomal subunit,
ribosome biogenesis,
| details | | CFinderM001083 | MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Pseudo ARR-B Transcription_Regulator(from iTAK)
protein import into mitochondrial inner membrane,
transcription, DNA-dependent,
nucleus,
IWS1 Transcription_Regulator(from iTAK)
GNAT Transcription_Regulator(from iTAK)
| details | | CFinderM001332 | protein import into mitochondrial inner membrane,
mitochondrial electron transport, ubiquinol to cytochrome c,
ubiquinol-cytochrome-c reductase activity,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
ATP synthesis coupled proton transport,
hydrogen ion transmembrane transporter activity,
| details | | CFinderM001455 | Amino_sugar_and_nucleotide_sugar_metabolism
CAMK_CDPK (from iTAK)
carbohydrate phosphorylation,
mitochondrial electron transport, ubiquinol to cytochrome c,
galactose metabolic process,
ubiquinol-cytochrome-c reductase activity,
galactokinase activity,
| details | | CFinderM001550 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
oxidoreductase activity,
hydrogen ion transmembrane transporter activity,
ATP synthesis coupled proton transport,
| details |
4.Expression profilings |
