|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | cellular protein metabolic process, | 0.000824163 | GO:0044267 | | RLK-Pelle_RLCK-VIIa-2 (from iTAK) | 0.013271394 | GFam | | protein methylation, | 0.014133344 | GO:0006479 | | protein refolding, | 0.014133344 | GO:0042026 | | RNA_degradation | 0.023608047 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000021G1320 | Protein kinase superfamily protein | AT3G09830 (4.00E-142) | | PH01000026G0220 | Serinc-domain containing serine and sphingolipid biosynthesis protein | AT1G16180 (2.00E-169) | | PH01000203G0670 | Serinc-domain containing serine and sphingolipid biosynthesis protein | AT1G16180 (2.00E-119) | | PH01000311G1390 | DNAJ heat shock N-terminal domain-containing protein | AT2G35720 (1.00E-114) | | PH01000560G0030 | heat shock protein 60 | AT3G23990 (3.50E-40) | | PH01000646G0440 | arginine methyltransferase 11 | AT4G29510 (7.00E-171) | | PH01000935G0120 | heat shock protein 60 | AT3G23990 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000433 | Ribosome_biogenesis_in_eukaryotes
ATP-dependent helicase activity,
threonine-tRNA ligase activity,
helicase activity,
| details | | CFinderM000622 | exocyst,
SOS_response
DNA-dependent ATPase activity,
single-stranded DNA binding,
DNA metabolic process,
exocytosis,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM000959 | RLK-Pelle_PERK-1 (from iTAK)
| details | | CFinderM001030 | protein import into mitochondrial inner membrane,
RLK-Pelle_L-LEC (from iTAK)
protein methylation,
| details | | CFinderM001585 | bZIP Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001624 | nuclear pore,
ribonucleoside_binding
NAC Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase activity,
DNA-directed RNA polymerase activity,
| details | | CFinderM001746 | cellular amino acid metabolic process,
Glycine,_serine_and_threonine_metabolism
aminoacylase activity,
Lysine_biosynthesis
Arginine_and_proline_metabolism
Cysteine_and_methionine_metabolism
metallopeptidase activity,
| details | | CFinderM001755 | STE_STE7 (from iTAK)
nucleotide-sugar transport,
S-adenosylmethionine_biosynthetic_process
carbohydrate transport,
| details | | CFinderM001791 | valyl-tRNA aminoacylation,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
tRNA aminoacylation for protein translation,
| details | | CFinderM001871 | Steroid_biosynthesis
steroid biosynthetic process,
sterol_24-C-methyltransferase_activity
| details |
4.Expression profilings |
