|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Steroid_biosynthesis | 0.004306034 | KEGG | | steroid biosynthetic process, | 0.008991424 | GO:0006694 | | sterol_24-C-methyltransferase_activity | 0.010210013 | GO:0003838 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000192G1350 | RNA-binding CRS1 / YhbY (CRM) domain protein | AT3G25440 (7.60E-97) | | PH01000203G0670 | Serinc-domain containing serine and sphingolipid biosynthesis protein | AT1G16180 (2.00E-119) | | PH01000295G0860 | RING-H2 finger C1A | AT2G40830 (2.10E-59) | | PH01000528G0420 | galacturonosyltransferase 7 | AT2G38650 (7.00E-143) | | PH01000903G0370 | MMS ZWEI homologue 3 | AT2G36060 (5.40E-72) | | PH01003039G0010 | sterol methyltransferase 1 | AT5G13710 (5.00E-165) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000615 | cellular protein metabolic process,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein methylation,
protein refolding,
RNA_degradation
| details | | CFinderM000697 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
| details | | CFinderM000724 | HSF Transcription_Regulator(from PlantTFDB)
metabolic process,
sterol_24-C-methyltransferase_activity
Steroid_biosynthesis
protein kinase C-activating G-protein coupled receptor signaling pathway,
steroid biosynthetic process,
diacylglycerol kinase activity,
NAD+ kinase activity,
| details | | CFinderM000905 | Sulfur_relay_system
| details | | CFinderM001585 | bZIP Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001591 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
metabolic process,
branched chain family amino acid metabolic process,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
branched-chain-amino-acid transaminase activity,
transferase activity, transferring pentosyl groups,
steroid biosynthetic process,
histidine biosynthetic process,
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
Pantothenate_and_CoA_biosynthesis
Histidine_metabolism
Steroid_biosynthesis
| details | | CFinderM001624 | nuclear pore,
ribonucleoside_binding
NAC Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase activity,
DNA-directed RNA polymerase activity,
| details | | CFinderM001682 | RLK-Pelle_WAK_LRK10L-1 (from iTAK)
Steroid_biosynthesis
sterol_24-C-methyltransferase_activity
steroid biosynthetic process,
single-stranded DNA binding,
| details | | CFinderM001683 | Steroid_biosynthesis
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
TKL-Pl-6 (from iTAK)
sterol_24-C-methyltransferase_activity
protein serine/threonine kinase activity,
protein phosphorylation,
steroid biosynthetic process,
single-stranded DNA binding,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
TKL-Pl-4 (from iTAK)
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001698 | Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
| details | | CFinderM001699 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
sterol_24-C-methyltransferase_activity
5S rRNA binding,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
Steroid_biosynthesis
steroid biosynthetic process,
branched chain family amino acid metabolic process,
ion transport,
| details | | CFinderM001746 | cellular amino acid metabolic process,
Glycine,_serine_and_threonine_metabolism
aminoacylase activity,
Lysine_biosynthesis
Arginine_and_proline_metabolism
Cysteine_and_methionine_metabolism
metallopeptidase activity,
| details | | CFinderM001755 | STE_STE7 (from iTAK)
nucleotide-sugar transport,
S-adenosylmethionine_biosynthetic_process
carbohydrate transport,
| details | | CFinderM001791 | valyl-tRNA aminoacylation,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
tRNA aminoacylation for protein translation,
| details | | CFinderM001880 | RNA_transport
C2H2 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
| details | | CFinderM001885 | Base_excision_repair
NAD+ ADP-ribosyltransferase activity,
GT29 GlycosylTransferases
protein ADP-ribosylation,
sialyltransferase activity,
protein ubiquitination,
protein glycosylation,
| details | | CFinderM001886 | Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
| details |
4.Expression profilings |
