CFinderM000677's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
UMP biosynthetic process,0.011674052GO:0006222
'de novo' pyrimidine base biosynthetic process,0.011674052GO:0006207
purine ribonucleotide biosynthetic process,0.011674052GO:0009152
histidyl-tRNA aminoacylation,0.011674052GO:0006427
Alanine,_aspartate_and_glutamate_metabolism0.012230357KEGG
IMP biosynthetic process,0.014937184GO:0006188
dihydroorotate oxidase activity,0.024272601GO:0004158
dihydroorotate dehydrogenase activity,0.024272601GO:0004152
translation_initiation_factor_binding0.024272601GO:0031369
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity,0.024272601GO:0004018
histidine-tRNA ligase activity,0.024272601GO:0004821
nucleotide-excision repair,0.031072491GO:0006289
proteolysis,0.034638713GO:0006508
ATP-dependent DNA helicase activity,0.037059969GO:0004003
translational initiation,0.040706274GO:0006413
nucleobase-containing compound metabolic process,0.049201988GO:0006139
RNA-dependent DNA replication,0.049201988GO:0006278

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000258G0700RAD3-like DNA-binding helicase proteinAT1G03190 (0.00E+00)
PH01000437G0840presequence protease 1AT3G19170 (0)
PH01000553G0690TRICHOME BIREFRINGENCE-LIKE 13AT2G14530 (2.00E-148)
PH01000733G0640L-Aspartase-like family proteinAT4G18440 (0.00E+00)
PH01000750G0620Transducin family protein / WD-40 repeat family proteinAT4G07410 (0.00E+00)
PH01000866G0120-AT5G55610 (7.10E-46)
PH01000996G0480translation initiation factor 3B1AT5G27640 (0.00E+00)
PH01001023G0020pyrimidine dAT5G23300 (0.00E+00)
PH01001592G0110Class II aaRS and biotin synthetases superfamily proteinAT3G02760 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001167RNA_transport
Alanine,_aspartate_and_glutamate_metabolism
eukaryotic translation initiation factor 3 complex,
IMP biosynthetic process,
purine ribonucleotide biosynthetic process,
multicellular organismal development,
translation_initiation_factor_binding
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity,
bHLH Transcription_Regulator(from PlantTFDB)
translational initiation,
Purine_metabolism
details

4.Expression profilings


Show details about module gene expression profiling