CFinderM000842's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Carbon_fixation_in_photosynthetic_organisms0.000941679KEGG
nuclear chromosome,0.006011678GO:0000228
Ino80_complex0.006011678GO:0031011
ribulose-phosphate 3-epimerase activity,0.007425345GO:0004750
helicase activity,0.007425345GO:0004386
phosphoglycerate kinase activity,0.007425345GO:0004618
SNF2 Transcription_Regulator(from iTAK)0.010672624GFam
racemase and epimerase activity, acting on carbohydrates and derivatives,0.020862254GO:0016857
Pentose_phosphate_pathway0.034460523KEGG
Pentose_and_glucuronate_interconversions0.034460523KEGG
pentose-phosphate shunt,0.041848531GO:0006098

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000123G1110phosphoglycerate kinaseAT1G79550 (0.00E+00)
PH01000235G0820sister chromatid cohesion 1 protein 4AT5G16270 (5.00E-106)
PH01000428G1030-AT3G45830 (0.00E+00)
PH01000492G0180-AT1G09330 (1.80E-67)
PH01000838G0200Aldolase-type TIM barrel family proteinAT3G01850 (3.00E-102)
PH01001590G0380P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT2G28290 (0.00E+00)
PH01002270G0240ATP-dependent helicase family proteinAT1G08060 (1.30E-88)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000116nuclear chromosome,
riboflavin synthase complex,
riboflavin biosynthetic process,
phosphoglycerate kinase activity,
glycolysis,
Riboflavin_metabolism
details
CFinderM000117nuclear chromosome,
Glycolysis_/_Gluconeogenesis
Ino80_complex
ATP citrate synthase activity,
phosphoglycerate kinase activity,
succinate-CoA ligase (ADP-forming) activity,
details
CFinderM000843ribulose-phosphate 3-epimerase activity,
helicase activity,
SNF2 Transcription_Regulator(from iTAK)
racemase and epimerase activity, acting on carbohydrates and derivatives,
pentose-phosphate shunt,
Carbon_fixation_in_photosynthetic_organisms
Pentose_and_glucuronate_interconversions
Pentose_phosphate_pathway
details

4.Expression profilings