CFinderM000916's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
bZIP Transcription_Regulator(from PlantTFDB)0.001698178GFam
Protein_export0.014256189KEGG
MYB_related Transcription_Regulator(from PlantTFDB)0.049290972GFam
MYB-related Transcription_Regulator(from iTAK)0.049290972GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000021G0790Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1AT1G65650 (4.00E-127)
PH01000095G1840basic leucine zipper 9AT5G24800 (5.40E-33)
PH01000171G1010myb-like transcription factor family proteinAT1G70000 (4.40E-29)
PH01000465G0960Pentatricopeptide repeat (PPR) superfamily proteinAT1G62350 (4.10E-53)
PH01000496G0060-- (-)
PH01000836G0690Pyridoxamine 5-phosphate oxidase family proteinAT1G51560 (1.00E-125)
PH01003464G0060-- (-)
PH01004090G0100plastidic type i signal peptidase 1AT3G24590 (4.60E-37)
PH01006080G0010bZIP transcription factor family proteinAT5G28770 (1.10E-27)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000597GH100 Glycoside_Hydrolases
RLK-Pelle_SD-2b (from iTAK)
details
CFinderM000924Ribosome_biogenesis_in_eukaryotes
Protein_export
omega_peptidase_activity
ribosome biogenesis,
details
CFinderM001194bZIP Transcription_Regulator(from PlantTFDB)
RNA_degradation
sequence-specific DNA binding,
details
CFinderM001200GH100 Glycoside_Hydrolases
Lipoic_acid_metabolism
octanoyltransferase activity,
glycopeptide_alpha-N-acetylgalactosaminidase_activity
lipoate biosynthetic process,
Protein_export
cellular protein modification process,
serine-type peptidase activity,
details
CFinderM001311Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
serine-type peptidase activity,
CAMK_CDPK (from iTAK)
histone modification,
phospholipid biosynthetic process,
aromatic amino acid family biosynthetic process,
phosphatidylserine decarboxylase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
details
CFinderM001351GH100 Glycoside_Hydrolases
Protein_export
glycopeptide_alpha-N-acetylgalactosaminidase_activity
serine-type peptidase activity,
details
CFinderM001391Lysine_biosynthesis
L,L-diaminopimelate_aminotransferase_activity
C3H Transcription_Regulator(from PlantTFDB)
lysine biosynthetic process via diaminopimelate,
details

4.Expression profilings


Show details about module gene expression profiling