CFinderM001391's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Lysine_biosynthesis0.003931966KEGG
L,L-diaminopimelate_aminotransferase_activity0.009513392GO:0010285
C3H Transcription_Regulator(from PlantTFDB)0.015648457GFam
lysine biosynthetic process via diaminopimelate,0.021856546GO:0009089

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000203G0690zinc finger (CCCH-type) family protein / D111/G-patch domain-containing proteinAT2G24830 (4.00E-119)
PH01000439G1050-AT1G31870 (6.00E-112)
PH01000496G0060-- (-)
PH01000836G0690Pyridoxamine 5-phosphate oxidase family proteinAT1G51560 (1.00E-125)
PH01001204G0140-AT3G56720 (1.80E-34)
PH01001393G0210Sec14p-like phosphatidylinositol transfer family proteinAT2G21520 (1.00E-167)
PH01001587G0070Pyridoxal phosphate (PLP)-dependent transferases superfamily proteinAT4G33680 (7.00E-177)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000273Lysine_biosynthesis
L,L-diaminopimelate_aminotransferase_activity
lysine biosynthetic process via diaminopimelate,
RLK-Pelle_LRR-Xb-1 (from iTAK)
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
details
CFinderM000496cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
Pseudo ARR-B Transcription_Regulator(from iTAK)
ubiquitin-dependent protein catabolic process,
diphosphomevalonate decarboxylase activity,
L,L-diaminopimelate_aminotransferase_activity
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
details
CFinderM000916bZIP Transcription_Regulator(from PlantTFDB)
Protein_export
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000924Ribosome_biogenesis_in_eukaryotes
Protein_export
omega_peptidase_activity
ribosome biogenesis,
details
CFinderM001351GH100 Glycoside_Hydrolases
Protein_export
glycopeptide_alpha-N-acetylgalactosaminidase_activity
serine-type peptidase activity,
details

4.Expression profilings