CFinderM001199's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
proton-transporting two-sector ATPase complex, catalytic domain,0.005897949GO:0033178
proton-transporting ATP synthase complex, catalytic core F(1),0.005897949GO:0045261
CMGC_CDK-PITSLRE (from iTAK)0.009112874GFam
HB-other Transcription_Regulator(from PlantTFDB)0.013344261GFam
C3H Transcription_Regulator(from PlantTFDB)0.032600952GFam
tricarboxylic acid cycle,0.043790583GO:0006099
ATP synthesis coupled proton transport,0.043790583GO:0015986
ATP hydrolysis coupled proton transport,0.043790583GO:0015991
Pyruvate_metabolism0.047843202KEGG
Carbon_fixation_pathways_in_prokaryotes0.047843202KEGG
Methane_metabolism0.047843202KEGG
Carbon_fixation_in_photosynthetic_organisms0.047843202KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000046G0140Homeodomain-like transcriptional regulatorAT5G44180 (0.00E+00)
PH01000145G0150O-Glycosyl hydrolases family 17 proteinAT5G58090 (8.00E-146)
PH01000169G1160Zinc finger C-x8-C-x5-C-x3-H type family proteinAT1G21580 (1.00E-106)
PH01000432G0070Protein kinase superfamily proteinAT1G67580 (1.00E-123)
PH01000525G0720transducin family protein / WD-40 repeat family proteinAT3G18060 (0.00E+00)
PH01001548G0500ATP synthase alpha/beta family proteinAT5G08690 (0.00E+00)
PH01004458G0030phosphoenolpyruvate carboxylase 1AT1G53310 (0)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000623intracellular,
Ribosome
translation,
structural constituent of ribosome,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001173HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001320CMGC_CDK-PITSLRE (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
details
CFinderM001569Alanine,_aspartate_and_glutamate_metabolism
TAZ Transcription_Regulator(from iTAK)
Group-Pl-3 (from iTAK)
CMGC_CLK (from iTAK)
NF-YC Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
arginine biosynthetic process,
'de novo' IMP biosynthetic process,
eukaryotic translation elongation factor 1 complex,
argininosuccinate synthase activity,
phosphoribosylformylglycinamidine cyclo-ligase activity,
details
CFinderM001800proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
proton transport,
nucleoside-triphosphatase activity,
double-stranded RNA binding,
details

4.Expression profilings