CFinderM001273's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000025G0890EXS (ERD1/XPR1/SYG1) family proteinAT5G35730 (3.50E-68)
PH01001484G0450Ribosomal protein L4/L1 familyAT2G20060 (9.00E-102)
PH01001911G0130acetyl-CoA synthetaseAT5G36880 (0.00E+00)
PH01002294G0240lipid phosphate phosphatase 2AT1G15080 (2.90E-38)
PH01002443G0110Riboflavin synthase-like superfamily proteinAT1G19230 (3.00E-130)
PH01003834G0160Eukaryotic aspartyl protease family proteinAT1G49050 (4.00E-119)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000319nucleoside_diphosphate_phosphorylation
carbohydrate phosphorylation,
histone_H4_acetylation
UTP biosynthetic process,
CTP biosynthetic process,
histone_H2A_acetylation
GTP biosynthetic process,
aromatic amino acid family metabolic process,
chromatin remodeling,
details
CFinderM000526Phenylpropanoid_biosynthesis
Phenylalanine_metabolism
Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis
cellular metabolic process,
coenzyme binding,
Flavonoid_biosynthesis
Ubiquinone_and_other_terpenoid-quinone_biosynthesis
details
CFinderM000606histone_H2A_acetylation
CTP biosynthetic process,
histone_H4_acetylation
protein neddylation,
nucleoside_diphosphate_phosphorylation
UTP biosynthetic process,
GTP biosynthetic process,
carbohydrate phosphorylation,
chromatin remodeling,
details
CFinderM000724HSF Transcription_Regulator(from PlantTFDB)
metabolic process,
sterol_24-C-methyltransferase_activity
Steroid_biosynthesis
protein kinase C-activating G-protein coupled receptor signaling pathway,
steroid biosynthetic process,
diacylglycerol kinase activity,
NAD+ kinase activity,
details
CFinderM000744Arginine_and_proline_metabolism
Phagosome
details
CFinderM000816CMGC_CDK-CRK7-CDK9 (from iTAK)
details
CFinderM000925Ribosome
translation,
fructose_6-phosphate_metabolic_process
Fructose_and_mannose_metabolism
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
structural constituent of ribosome,
large ribosomal subunit,
6-phosphofructokinase complex,
6-phosphofructokinase activity,
details
CFinderM001156single-stranded DNA binding,
DNA_replication
details
CFinderM001197Ribosome
translation,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
L-ascorbic acid binding,
structural constituent of ribosome,
Arginine_and_proline_metabolism
details
CFinderM001212SCY1_SCYL2 (from iTAK)
Ribosome
translation,
structural constituent of ribosome,
details
CFinderM001250Endocytosis
cysteine-type endopeptidase activity,
details
CFinderM001693translation,
Ribosome
structural constituent of ribosome,
intracellular,
details
CFinderM001753Endocytosis
HSF Transcription_Regulator(from PlantTFDB)
single-stranded DNA binding,
details
CFinderM001852calcium-dependent phospholipid binding,
single-stranded DNA binding,
DNA_replication
details

4.Expression profilings