CFinderM001299's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SNARE_interactions_in_vesicular_transport0.006545908KEGG
Golgi vesicle transport,0.027450753GO:0048193
bZIP Transcription_Regulator(from PlantTFDB)0.035090476GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000017G0420tobamovirus multiplication protein 3AT2G02180 (6.00E-100)
PH01000093G1750O-fucosyltransferase family proteinAT3G26370 (0.00E+00)
PH01001046G0430Actin-like ATPase superfamily proteinAT1G30540 (1.00E-122)
PH01001870G0190Basic-leucine zipper (bZIP) transcription factor family proteinAT1G06070 (3.00E-50)
PH01002862G0170NAD(P)-binding Rossmann-fold superfamily proteinAT3G03330 (3.50E-77)
PH01003542G0170NHL domain-containing proteinAT1G70280 (7.00E-136)
PH01006766G0010syntaxin of plants 61AT1G28490 (9.10E-61)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000133C2H2 Transcription_Regulator(from PlantTFDB)
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
carbohydrate phosphorylation,
details
CFinderM001059Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
SNARE_interactions_in_vesicular_transport
Golgi vesicle transport,
aromatic amino acid family biosynthetic process,
phosphatidylinositol metabolic process,
RNA_degradation
details
CFinderM001179Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
details
CFinderM001206Riboflavin_metabolism
riboflavin kinase activity,
riboflavin biosynthetic process,
bZIP Transcription_Regulator(from PlantTFDB)
nucleosome assembly,
details
CFinderM001362Protein_processing_in_endoplasmic_reticulum
mannose biosynthetic process,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
phosphomannomutase activity,
histone_lysine_methylation
details
CFinderM001556RNA_transport
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001583endoplasmic reticulum,
bZIP Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings