|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GH47 Glycoside_Hydrolases | 0.000937412 | GFam | | purine ribonucleoside monophosphate biosynthetic process, | 0.004123646 | GO:0009168 | | IMP biosynthetic process, | 0.004123646 | GO:0006188 | | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, | 0.013582703 | GO:0004571 | | deaminase activity, | 0.013582703 | GO:0019239 | | AMP deaminase activity, | 0.013582703 | GO:0003876 | | potassium_ion_transmembrane_transport | 0.016784365 | GO:0071805 | | membrane, | 0.021612693 | GO:0016020 | | potassium ion transmembrane transporter activity, | 0.047740806 | GO:0015079 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000141G0850 | RNA-binding KH domain-containing protein | AT1G09660 (7.70E-89) | | PH01000706G0540 | Glycosyl hydrolase family 47 protein | AT1G27520 (9.00E-160) | | PH01000890G0410 | K+ uptake permease 7 | AT5G09400 (5.00E-173) | | PH01001658G0300 | AMP deaminase, putative / myoadenylate deaminase, putative | AT2G38280 (0.00E+00) | | PH01002305G0140 | ortholog of human splicing factor SC35 | AT5G64200 (1.60E-48) | | PH01173539G0010 | cyclic nucleotide gated channel 1 | AT5G53130 (2.70E-80) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000315 | AGC_NDR (from iTAK)
Jumonji Transcription_Regulator(from iTAK)
phagocytosis,
phosphorylation,
cytoskeleton,
Spliceosome
| details | | CFinderM000316 | RLK-Pelle_RLCK-IV (from iTAK)
AGC_NDR (from iTAK)
Jumonji Transcription_Regulator(from iTAK)
signal transducer activity,
| details | | CFinderM000743 | Spliceosome
protein catabolic process,
| details | | CFinderM000746 | CMGC_DYRK-YAK (from iTAK)
TKL-Pl-6 (from iTAK)
| details | | CFinderM001124 | AGC_NDR (from iTAK)
Spliceosome
| details | | CFinderM001403 | CMGC_DYRK-PRP4 (from iTAK)
integral to membrane,
| details | | CFinderM001620 | GT37 GlycosylTransferases
cell wall biogenesis,
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
AMP deaminase activity,
deaminase activity,
galactoside 2-alpha-L-fucosyltransferase activity,
N-acetyltransferase_activity
| details | | CFinderM001621 | AGC_NDR (from iTAK)
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
ubiquitin ligase complex,
G-protein coupled receptor signaling pathway,
AMP deaminase activity,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
deaminase activity,
Spliceosome
| details | | CFinderM001738 | GT37 GlycosylTransferases
galactoside 2-alpha-L-fucosyltransferase activity,
cell wall biogenesis,
cell death,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
membrane coat,
mRNA_surveillance_pathway
| details | | CFinderM001814 | Spliceosome
nucleotide binding,
snRNA_binding
nuclear mRNA splicing, via spliceosome,
phospholipid transport,
phospholipid-translocating ATPase activity,
cation transport,
| details | | CFinderM001859 | protein catabolic process,
| details |
4.Expression profilings |
