CFinderM001762's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
isocitrate metabolic process,0.003093218GO:0006102
formaldehyde_catabolic_process0.003093218GO:0046294
isocitrate dehydrogenase (NADP+) activity,0.01020762GO:0004450
S-formylglutathione hydrolase activity,0.01020762GO:0018738
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,0.013599528GO:0015018
carboxylesterase activity,0.013599528GO:0004091
Carbon_fixation_pathways_in_prokaryotes0.032993145KEGG
Peroxisome0.032993145KEGG
Glutathione_metabolism0.032993145KEGG
Citrate_cycle_(TCA_cycle)0.032993145KEGG
NAD binding,0.042007288GO:0051287

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000182G1450cytosolic NADP+-dependent isocitrate dehydrogenaseAT1G65930 (0.00E+00)
PH01000519G0850RINT-1 / TIP-1 familyAT3G47700 (0.00E+00)
PH01000669G0350S-formylglutathione hydrolaseAT2G41530 (1.50E-89)
PH01000705G0460-AT3G17900 (8.50E-80)
PH01000822G0290Nucleotide-diphospho-sugar transferases superfamily proteinAT1G27600 (2.70E-65)
PH01001333G0220transmembrane nine 1AT1G10950 (0)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000263Spliceosome
HRT-like Transcription_Regulator(from PlantTFDB)
HRT Transcription_Regulator(from iTAK)
nucleotide binding,
nucleic acid binding,
serine-type endopeptidase activity,
details
CFinderM000681protein arginylation,
GH47 Glycoside_Hydrolases
arginyltransferase activity,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
details
CFinderM001192HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
isocitrate metabolic process,
PHD Transcription_Regulator(from iTAK)
COPI vesicle coat,
membrane coat,
Glutathione_metabolism
Citrate_cycle_(TCA_cycle)
Carbon_fixation_pathways_in_prokaryotes
Peroxisome
isocitrate dehydrogenase (NADP+) activity,
details
CFinderM001193HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
hydrolase activity, acting on glycosyl bonds,
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
integral to membrane,
details
CFinderM001430HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
hydrolase activity, acting on glycosyl bonds,
details
CFinderM001493ARID Transcription_Regulator(from iTAK)
magnesium_ion_transport
magnesium_ion_transmembrane_transporter_activity
details
CFinderM001605isocitrate metabolic process,
isocitrate dehydrogenase (NADP+) activity,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
Glutathione_metabolism
Peroxisome
NAD binding,
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,
magnesium ion binding,
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
membrane coat,
COPI vesicle coat,
structural molecule activity,
details
CFinderM001792galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
isocitrate metabolic process,
PHD Transcription_Regulator(from iTAK)
isocitrate dehydrogenase (NADP+) activity,
Carbon_fixation_pathways_in_prokaryotes
Peroxisome
Glutathione_metabolism
Citrate_cycle_(TCA_cycle)
details
CFinderM001817GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
details

4.Expression profilings