Function module details

CFinderM001762's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
isocitrate metabolic process,	0.003093218	GO:0006102
formaldehyde_catabolic_process	0.003093218	GO:0046294
isocitrate dehydrogenase (NADP+) activity,	0.01020762	GO:0004450
S-formylglutathione hydrolase activity,	0.01020762	GO:0018738
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,	0.013599528	GO:0015018
carboxylesterase activity,	0.013599528	GO:0004091
Carbon_fixation_pathways_in_prokaryotes	0.032993145	KEGG
Peroxisome	0.032993145	KEGG
Glutathione_metabolism	0.032993145	KEGG
Citrate_cycle_(TCA_cycle)	0.032993145	KEGG
NAD binding,	0.042007288	GO:0051287

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000182G1450	cytosolic NADP+-dependent isocitrate dehydrogenase	AT1G65930 (0.00E+00)
PH01000519G0850	RINT-1 / TIP-1 family	AT3G47700 (0.00E+00)
PH01000669G0350	S-formylglutathione hydrolase	AT2G41530 (1.50E-89)
PH01000705G0460	-	AT3G17900 (8.50E-80)
PH01000822G0290	Nucleotide-diphospho-sugar transferases superfamily protein	AT1G27600 (2.70E-65)
PH01001333G0220	transmembrane nine 1	AT1G10950 (0)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000263	Spliceosome HRT-like Transcription_Regulator(from PlantTFDB) HRT Transcription_Regulator(from iTAK) nucleotide binding, nucleic acid binding, serine-type endopeptidase activity,	details
CFinderM000681	protein arginylation, GH47 Glycoside_Hydrolases arginyltransferase activity, mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, Various_types_of_N-glycan_biosynthesis N-Glycan_biosynthesis	details
CFinderM001192	HRT Transcription_Regulator(from iTAK) HRT-like Transcription_Regulator(from PlantTFDB) isocitrate metabolic process, PHD Transcription_Regulator(from iTAK) COPI vesicle coat, membrane coat, Glutathione_metabolism Citrate_cycle_(TCA_cycle) Carbon_fixation_pathways_in_prokaryotes Peroxisome isocitrate dehydrogenase (NADP+) activity,	details
CFinderM001193	HRT Transcription_Regulator(from iTAK) HRT-like Transcription_Regulator(from PlantTFDB) GH10 Glycoside_Hydrolases CBM22 Carbohydrate-Binding_Modules hydrolase activity, acting on glycosyl bonds, galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, integral to membrane,	details
CFinderM001430	HRT Transcription_Regulator(from iTAK) HRT-like Transcription_Regulator(from PlantTFDB) GH10 Glycoside_Hydrolases CBM22 Carbohydrate-Binding_Modules hydrolase activity, acting on glycosyl bonds,	details
CFinderM001493	ARID Transcription_Regulator(from iTAK) magnesium_ion_transport magnesium_ion_transmembrane_transporter_activity	details
CFinderM001605	isocitrate metabolic process, isocitrate dehydrogenase (NADP+) activity, Carbon_fixation_pathways_in_prokaryotes Citrate_cycle_(TCA_cycle) Glutathione_metabolism Peroxisome NAD binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, magnesium ion binding, galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, membrane coat, COPI vesicle coat, structural molecule activity,	details
CFinderM001792	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, isocitrate metabolic process, PHD Transcription_Regulator(from iTAK) isocitrate dehydrogenase (NADP+) activity, Carbon_fixation_pathways_in_prokaryotes Peroxisome Glutathione_metabolism Citrate_cycle_(TCA_cycle)	details
CFinderM001817	GH10 Glycoside_Hydrolases CBM22 Carbohydrate-Binding_Modules	details

4.Expression profilings