LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE021408

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE021408

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE021408AT1G04920.1sucrose phosphate synthase 3F1positive
GWHGAAZE025215AT2G41560.1autoinhibited Ca(2+)-ATPase, isoform 40.92positive
GWHGAAZE028894AT5G20280.1sucrose phosphate synthase 1F0.92positive
GWHGAAZE023470AT4G37640.1calcium ATPase 20.92positive
GWHGAAZE005068AT2G28120.1Major facilitator superfamily protein0.91positive
GWHGAAZE022685AT1G68750.1phosphoenolpyruvate carboxylase 40.91positive
GWHGAAZE030866AT1G80660.1H(+)-ATPase 90.91positive
GWHGAAZE030906----0.91positive
GWHGAAZE031557AT1G01050.1pyrophosphorylase 10.91positive
GWHGAAZE030789AT5G14040.1phosphate transporter 3;10.91positive
GWHGAAZE032990AT5G15650.1reversibly glycosylated polypeptide 20.91positive
GWHGAAZE014451----0.91positive
GWHGAAZE028446AT5G25880.1NADP-malic enzyme 30.91positive
GWHGAAZE025192AT5G13490.2ADP/ATP carrier 20.91positive
GWHGAAZE005360AT2G13620.1cation/hydrogen exchanger 150.91positive
GWHGAAZE033374AT5G13990.1exocyst subunit exo70 family protein C20.9positive
GWHGAAZE005533AT3G53750.1actin 30.9positive
GWHGAAZE009344AT2G29940.1pleiotropic drug resistance 30.9positive
GWHGAAZE030865AT1G80660.1H(+)-ATPase 90.9positive
GWHGAAZE025435AT2G13620.1cation/hydrogen exchanger 150.9positive
GWHGAAZE027532AT1G63930.1from the Czech 'roh' meaning 'corner'0.9positive
GWHGAAZE031182AT1G78980.1STRUBBELIG-receptor family 50.9positive
GWHGAAZE025623AT5G19610.1GNOM-like 20.9positive
GWHGAAZE005338----0.9positive
GWHGAAZE017366AT2G19770.1profilin 50.9positive
GWHGAAZE006063AT3G61230.1GATA type zinc finger transcription factor family protein0.9positive
GWHGAAZE030989AT2G19770.1profilin 50.9positive
GWHGAAZE029973AT3G19090.1RNA-binding protein0.9positive
GWHGAAZE017745AT2G33040.1gamma subunit of Mt ATP synthase0.9positive
GWHGAAZE013602AT1G23800.1aldehyde dehydrogenase 2B70.9positive
GWHGAAZE014831AT5G66740.1Protein of unknown function (DUF620)0.9positive
GWHGAAZE007662AT5G66020.1Phosphoinositide phosphatase family protein0.9positive
GWHGAAZE024160AT1G77120.1alcohol dehydrogenase 10.9positive
GWHGAAZE000696AT2G29620.1dentin sialophosphoprotein;(source:Araport11)0.89positive
GWHGAAZE026299AT4G25590.1actin depolymerizing factor 70.89positive
GWHGAAZE000318AT1G54560.1Myosin family protein with Dil domain0.89positive
GWHGAAZE006025AT5G41390.1PLAC8 family protein0.89positive
GWHGAAZE024819AT3G61760.1DYNAMIN-like 1B0.89positive
GWHGAAZE011986AT5G26250.1Major facilitator superfamily protein0.89positive
GWHGAAZE030982AT2G19860.1hexokinase 20.89positive
GWHGAAZE003232AT1G07410.1RAB GTPase homolog A2B0.89positive
GWHGAAZE009237AT3G53750.1actin 30.89positive
GWHGAAZE000425AT4G13230.1Late embryogenesis abundant protein (LEA) family protein0.89positive
GWHGAAZE025360AT3G27440.1uridine kinase-like 50.89positive
GWHGAAZE008007AT1G13560.1aminoalcoholphosphotransferase 10.89positive
GWHGAAZE014147AT1G47240.1NRAMP metal ion transporter 20.89positive
GWHGAAZE002242AT4G21490.1NAD(P)H dehydrogenase B30.89positive
GWHGAAZE018427AT4G39150.2DNAJ heat shock N-terminal domain-containing protein0.89positive
GWHGAAZE012355AT3G17630.1cation/H+ exchanger 190.89positive
GWHGAAZE026675AT3G53750.1actin 30.89positive
GWHGAAZE026987AT5G35700.1fimbrin-like protein 20.89positive
GWHGAAZE033561AT2G07360.1SH3 domain-containing protein0.89positive
GWHGAAZE013256AT4G36210.3Protein of unknown function (DUF726)0.89positive
GWHGAAZE015531AT3G18830.1polyol/monosaccharide transporter 50.89positive
GWHGAAZE033618AT2G19330.1plant intracellular ras group-related LRR 60.89positive
GWHGAAZE009716AT1G06750.1P-loop containing nucleoside triphosphate hydrolases superfamily protein0.89positive
GWHGAAZE022535AT5G35525.1PLAC8 family protein0.89positive
GWHGAAZE026448AT5G07490.1transmembrane protein;(source:Araport11)0.89positive
GWHGAAZE017708AT1G24400.1lysine histidine transporter 20.89positive
GWHGAAZE027860AT4G17920.1RING/U-box superfamily protein0.89positive
GWHGAAZE030815AT5G51030.1NAD(P)-binding Rossmann-fold superfamily protein0.89positive
GWHGAAZE003878AT2G21720.1Plant protein of unknown function (DUF639)0.89positive
GWHGAAZE022950AT4G11290.1Peroxidase superfamily protein0.89positive
GWHGAAZE024665AT5G57460.1TPLATE complex subunit involved in clathirin mediated endocytosis.0.88positive
GWHGAAZE002232AT2G20840.1Secretory carrier membrane protein (SCAMP) family protein0.88positive
GWHGAAZE026266AT1G54560.1Myosin family protein with Dil domain0.88positive
GWHGAAZE026621AT1G07410.1RAB GTPase homolog A2B0.88positive
GWHGAAZE017549AT1G80660.1H(+)-ATPase 90.88positive
GWHGAAZE002952AT3G07680.1emp24/gp25L/p24 family/GOLD family protein0.88positive
GWHGAAZE029829AT2G14520.1CBS domain-containing protein with a domain of unknown function (DUF21)0.88positive
GWHGAAZE023569AT1G29140.1Pollen Ole e 1 allergen and extensin family protein0.88positive
GWHGAAZE003041AT1G16560.3Per1-like family protein0.88positive
GWHGAAZE013074AT3G55610.1delta 1-pyrroline-5-carboxylate synthase 20.88positive
GWHGAAZE024511AT4G32060.1calcium-binding EF hand family protein0.88positive
GWHGAAZE017312----0.88positive
GWHGAAZE022283AT4G16480.1inositol transporter 40.88positive
GWHGAAZE001897AT5G44060.1embryo sac development arrest protein;(source:Araport11)0.88positive
GWHGAAZE003545AT4G25590.1actin depolymerizing factor 70.88positive
GWHGAAZE018242AT4G38190.1cellulose synthase like D40.88positive
GWHGAAZE028895AT1G05500.1Calcium-dependent lipid-binding (CaLB domain) family protein0.88positive
GWHGAAZE027713AT2G13620.1cation/hydrogen exchanger 150.88positive
GWHGAAZE020952AT2G43900.1Endonuclease/exonuclease/phosphatase family protein0.88positive
GWHGAAZE006420AT3G23310.1AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein0.88positive
GWHGAAZE024645AT5G17050.1UDP-glucosyl transferase 78D20.88positive
GWHGAAZE010667AT3G12660.1FASCICLIN-like arabinogalactan protein 14 precursor0.88positive
GWHGAAZE018452AT4G34490.1cyclase associated protein 10.88positive
GWHGAAZE012235AT2G47650.1UDP-xylose synthase 40.88positive
GWHGAAZE021921AT1G04600.1myosin XI A0.88positive
GWHGAAZE033472AT2G43900.1Endonuclease/exonuclease/phosphatase family protein0.88positive
GWHGAAZE026073AT5G35160.2Endomembrane protein 70 protein family0.88positive
GWHGAAZE001193AT5G21050.1hyccin;(source:Araport11)0.88positive
GWHGAAZE005384AT5G01300.1PEBP (phosphatidylethanolamine-binding protein) family protein0.88positive
GWHGAAZE023120AT1G63060.1ribosome biogenesis NEP1-like protein;(source:Araport11)0.88positive
GWHGAAZE029993AT2G15900.1Phox-associated domain;Phox-like;Sorting nexin, C-terminal0.88positive
GWHGAAZE001337AT5G24550.1beta glucosidase 320.88positive
GWHGAAZE016864AT2G13680.1callose synthase 50.88positive
GWHGAAZE005580AT3G09550.1Ankyrin repeat family protein0.88positive
GWHGAAZE000211AT2G48020.2Major facilitator superfamily protein0.88positive
GWHGAAZE026004AT2G26650.1K+ transporter 10.88positive
GWHGAAZE016896AT1G17500.1ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein0.88positive
GWHGAAZE016818AT2G13570.1nuclear factor Y, subunit B70.88positive
GWHGAAZE022752AT1G26480.1general regulatory factor 120.88positive
GWHGAAZE011937AT5G26250.1Major facilitator superfamily protein0.88positive
GWHGAAZE011637AT4G14368.1Regulator of chromosome condensation (RCC1) family protein0.87positive
GWHGAAZE033300AT5G40610.1NAD-dependent glycerol-3-phosphate dehydrogenase family protein0.87positive
GWHGAAZE017822AT1G26850.2S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.87positive
GWHGAAZE027633AT1G63000.1nucleotide-rhamnose synthase/epimerase-reductase0.87positive
GWHGAAZE007484AT3G51070.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.87positive
GWHGAAZE011938AT5G26250.1Major facilitator superfamily protein0.87positive
GWHGAAZE022384AT3G19940.1Major facilitator superfamily protein0.87positive
GWHGAAZE027505AT1G64320.1myosin heavy chain-related0.87positive
GWHGAAZE008910AT1G18980.1RmlC-like cupins superfamily protein0.87positive
GWHGAAZE032735AT5G09550.1GDP dissociation inhibitor family protein / Rab GTPase activator family protein0.87positive
GWHGAAZE025424AT1G27930.1Protein of unknown function (DUF579)0.87positive
GWHGAAZE016163AT1G22730.1MA3 domain-containing protein0.87positive
GWHGAAZE033325AT1G13440.1glyceraldehyde-3-phosphate dehydrogenase C20.87positive
GWHGAAZE006421AT1G35670.1calcium-dependent protein kinase 20.87positive
GWHGAAZE032091AT5G20350.1Ankyrin repeat family protein with DHHC zinc finger domain0.87positive
GWHGAAZE000495AT3G07330.1Cellulose-synthase-like C60.87positive
GWHGAAZE025723AT2G19770.1profilin 50.87positive
GWHGAAZE006472AT3G07880.1Immunoglobulin E-set superfamily protein0.87positive
GWHGAAZE015112AT5G17310.2UDP-glucose pyrophosphorylase 20.87positive
GWHGAAZE008090AT2G13570.1nuclear factor Y, subunit B70.87positive
GWHGAAZE021772AT1G04670.1hypothetical protein;(source:Araport11)0.87positive
GWHGAAZE005800AT3G52600.1cell wall invertase 20.87positive
GWHGAAZE006733AT5G46360.1Ca2+ activated outward rectifying K+ channel 30.87positive
GWHGAAZE019967AT1G01990.1hypothetical protein;(source:Araport11)0.87positive
GWHGAAZE005834AT1G33170.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.87positive
GWHGAAZE002446AT3G07820.1Pectin lyase-like superfamily protein0.87positive
GWHGAAZE023596AT4G19040.2ENHANCED DISEASE RESISTANCE 20.87positive
GWHGAAZE011279AT5G24560.1phloem protein 2-B120.87positive
GWHGAAZE008513AT1G55570.1SKU5 similar 120.87positive
GWHGAAZE008511AT1G55570.1SKU5 similar 120.87positive
GWHGAAZE032768AT4G37990.1elicitor-activated gene 3-20.87positive
GWHGAAZE009979AT1G56600.1galactinol synthase 20.86positive
GWHGAAZE026750AT5G63220.1golgi-to-ER traffic-like protein;(source:Araport11)0.86positive
GWHGAAZE007146AT3G57200.1glycosyltransferase-like protein;(source:Araport11)0.86positive
GWHGAAZE030385AT1G63640.1P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain0.86positive
GWHGAAZE005534AT2G37670.1Transducin/WD40 repeat-like superfamily protein0.86positive
GWHGAAZE004504AT4G18050.1P-glycoprotein 90.86positive
GWHGAAZE008902AT5G22390.1Protein of unknown function (DUF3049)0.86positive
GWHGAAZE026170AT1G78570.1rhamnose biosynthesis 10.86positive
GWHGAAZE014461AT3G45070.1P-loop containing nucleoside triphosphate hydrolases superfamily protein0.86positive
GWHGAAZE026971AT2G32970.2G1/S-specific cyclin-E protein;(source:Araport11)0.86positive
GWHGAAZE019973AT2G47340.1Plant invertase/pectin methylesterase inhibitor superfamily protein0.86positive
GWHGAAZE007420AT5G66740.1Protein of unknown function (DUF620)0.86positive
GWHGAAZE000789AT3G11570.1TRICHOME BIREFRINGENCE-LIKE 80.86positive
GWHGAAZE011270AT5G24560.1phloem protein 2-B120.86positive
GWHGAAZE023078AT1G27990.1transmembrane protein;(source:Araport11)0.86positive
GWHGAAZE028588AT4G13260.1Flavin-binding monooxygenase family protein0.86positive
GWHGAAZE003415AT5G07490.1transmembrane protein;(source:Araport11)0.86positive
GWHGAAZE025520AT4G09510.1cytosolic invertase 20.86positive
GWHGAAZE009444AT2G30505.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.86positive
GWHGAAZE012943AT3G52850.1vacuolar sorting receptor homolog 10.86positive
GWHGAAZE028375AT1G67290.1glyoxal oxidase-related protein0.86positive
GWHGAAZE018454AT2G16230.1O-Glycosyl hydrolases family 17 protein0.86positive
GWHGAAZE029628AT4G35790.2phospholipase D delta0.86positive
GWHGAAZE023252AT3G50440.1methyl esterase 100.86positive
GWHGAAZE028946AT5G54830.1DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein0.86positive
GWHGAAZE000451AT3G25030.2RING/U-box superfamily protein0.86positive
GWHGAAZE016552AT1G75180.3Erythronate-4-phosphate dehydrogenase family protein0.86positive
GWHGAAZE027116AT1G29140.1Pollen Ole e 1 allergen and extensin family protein0.86positive
GWHGAAZE029989AT3G19020.1Leucine-rich repeat (LRR) family protein0.86positive
GWHGAAZE015530AT4G36670.1Major facilitator superfamily protein0.86positive
GWHGAAZE018416AT4G39090.1Papain family cysteine protease0.86positive
GWHGAAZE024975AT1G12360.1Sec1/munc18-like (SM) proteins superfamily0.86positive
GWHGAAZE022356AT3G19940.1Major facilitator superfamily protein0.86positive
GWHGAAZE031162AT3G21180.1autoinhibited Ca(2+)-ATPase 90.86positive
GWHGAAZE018239AT4G35410.2Clathrin adaptor complex small chain family protein0.86positive
GWHGAAZE009346AT1G07220.1Arabidopsis thaliana protein of unknown function (DUF821)0.86positive
GWHGAAZE033599AT5G57200.1ENTH/ANTH/VHS superfamily protein0.86positive
GWHGAAZE017502AT3G15730.1phospholipase D alpha 10.86positive
GWHGAAZE006232AT4G17250.1transmembrane protein;(source:Araport11)0.86positive
GWHGAAZE000549AT2G46170.1Reticulon family protein0.86positive
GWHGAAZE033110AT5G39570.1Protein of unknown function. Binds phosphatidic acid and acts downstream of PLDalpha.0.86positive
GWHGAAZE002788AT5G54650.2formin homology50.86positive
GWHGAAZE023480AT5G67550.1transmembrane protein;(source:Araport11)0.86positive
GWHGAAZE013565AT1G10385.1Vps51/Vps67 family (components of vesicular transport) protein0.86positive
GWHGAAZE009128AT3G09740.1syntaxin of plants 710.86positive
GWHGAAZE018324AT2G16730.1glycosyl hydrolase family 35 protein0.86positive
GWHGAAZE026028AT4G32390.1Nucleotide-sugar transporter family protein0.86positive
GWHGAAZE004239AT2G19440.1O-Glycosyl hydrolases family 17 protein0.86positive
GWHGAAZE009695AT3G11950.2TRAF-like superfamily protein0.86positive
GWHGAAZE007731AT5G17330.1glutamate decarboxylase0.86positive


Expression profiling, GSEA and motif analysis