CFinderM000679's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
chromosome organization,0.014046904GO:0051276
glucose metabolic process,0.014046904GO:0006006
chromosome,0.015720244GO:0005694
Glycolysis_/_Gluconeogenesis0.021007514KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000003G0060glyceraldehyde-3-phosphate dehydrogenase C subunit 1AT3G04120 (1.00E-160)
PH01000005G2550Structural maintenance of chromosomes (SMC) family proteinAT2G27170 (1.00E-101)
PH01000005G2560Structural maintenance of chromosomes (SMC) family proteinAT2G27170 (1.00E-131)
PH01000722G0050PHD finger family proteinAT1G77800 (2.00E-110)
PH01000928G0240homolog of separaseAT4G22970 (7.00E-133)
PH01001540G0230SNF2 domain-containing protein / helicase domain-containing proteinAT3G12810 (1.20E-56)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000058cysteamine dioxygenase activity,
LBD Transcription_Regulator(from PlantTFDB)
oxidation-reduction process,
Taurine_and_hypotaurine_metabolism
details
CFinderM000115Dof Transcription_Regulator(from PlantTFDB)
AUX/IAA Transcription_Regulator(from iTAK)
C2C2-Dof Transcription_Regulator(from iTAK)
TKL-Pl-4 (from iTAK)
details
CFinderM000431Porphyrin_and_chlorophyll_metabolism
C2C2-Dof Transcription_Regulator(from iTAK)
HB-BELL Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
oxygen-dependent protoporphyrinogen oxidase activity,
details
CFinderM000989cysteinyl-tRNA aminoacylation,
proton transport,
cysteine-tRNA ligase activity,
tRNA aminoacylation for protein translation,
Aminoacyl-tRNA_biosynthesis
Oxidative_phosphorylation
hydrogen-translocating pyrophosphatase activity,
details
CFinderM001238glycolysis,
fructose-bisphosphate aldolase activity,
Fructose_and_mannose_metabolism
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glycolysis_/_Gluconeogenesis
Pentose_phosphate_pathway
details
CFinderM001425chromosome organization,
negative_regulation_of_transcription,_DNA-templated
chromosome,
RNA_degradation
details
CFinderM001614nucleotide binding,
ATP binding,
chromosome organization,
valyl-tRNA aminoacylation,
valine-tRNA ligase activity,
GPI anchor biosynthetic process,
chromosome,
endoplasmic reticulum membrane,
DNA metabolic process,
aminoacyl-tRNA_editing_activity
DNA-dependent ATPase activity,
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
Homologous_recombination
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation for protein translation,
details
CFinderM001707glucose metabolic process,
valyl-tRNA aminoacylation,
negative_regulation_of_transcription,_DNA-templated
glucose-6-phosphate dehydrogenase activity,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Pentose_phosphate_pathway
Glutathione_metabolism
tRNA aminoacylation for protein translation,
details

4.Expression profilings