CFinderM000431's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Porphyrin_and_chlorophyll_metabolism0.020803235KEGG
C2C2-Dof Transcription_Regulator(from iTAK)0.032332353GFam
HB-BELL Transcription_Regulator(from iTAK)0.032332353GFam
TRAF Transcription_Regulator(from iTAK)0.032332353GFam
Dof Transcription_Regulator(from PlantTFDB)0.032332353GFam
TALE Transcription_Regulator(from PlantTFDB)0.032332353GFam
oxygen-dependent protoporphyrinogen oxidase activity,0.043913246GO:0004729

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000026G1190-AT2G12400 (3.90E-86)
PH01000192G0340Flavin containing amine oxidoreductase familyAT5G14220 (2.00E-117)
PH01000194G0150BTB-POZ and MATH domain 1AT5G19000 (8.50E-51)
PH01000211G0640Dof-type zinc finger DNA-binding family proteinAT3G61850 (9.10E-38)
PH01000223G1160POX (plant homeobox) family proteinAT5G02030 (1.60E-65)
PH01000447G0830basic helix-loop-helix (bHLH) DNA-binding superfamily proteinAT1G31050 (2.20E-33)
PH01000549G0690PHD finger family proteinAT5G15540 (0.00E+00)
PH01000722G0050PHD finger family proteinAT1G77800 (2.00E-110)
PH01001618G0170-- (-)
PH01002051G0230histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)AT1G77300 (1.00E-125)
PH01004295G0010trehalose phosphatase/synthase 5AT4G17770 (2.00E-151)
PH01004624G0020little nuclei4AT5G65770 (1.00E-164)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000038bHLH Transcription_Regulator(from PlantTFDB)
details
CFinderM000058cysteamine dioxygenase activity,
LBD Transcription_Regulator(from PlantTFDB)
oxidation-reduction process,
Taurine_and_hypotaurine_metabolism
details
CFinderM000115Dof Transcription_Regulator(from PlantTFDB)
AUX/IAA Transcription_Regulator(from iTAK)
C2C2-Dof Transcription_Regulator(from iTAK)
TKL-Pl-4 (from iTAK)
details
CFinderM000149SET Transcription_Regulator(from iTAK)
DDT Transcription_Regulator(from iTAK)
GTnc GlycosylTransferases
mitochondrial inner membrane,
exocyst,
details
CFinderM000162CAMTA Transcription_Regulator(from PlantTFDB)
AUX/IAA Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
C2C2-Dof Transcription_Regulator(from iTAK)
AGC_RSK-2 (from iTAK)
zinc_ion_transmembrane_transport
details
CFinderM000191TALE Transcription_Regulator(from PlantTFDB)
HB-KNOX Transcription_Regulator(from iTAK)
regulation of transcription, DNA-dependent,
HB-BELL Transcription_Regulator(from iTAK)
protein complex,
nucleus,
microtubule,
AUX/IAA Transcription_Regulator(from iTAK)
Phagosome
selenium binding,
sequence-specific DNA binding,
structural constituent of cytoskeleton,
sequence-specific DNA binding transcription factor activity,
trehalose biosynthetic process,
microtubule-based process,
protein polymerization,
details
CFinderM000679chromosome organization,
glucose metabolic process,
chromosome,
Glycolysis_/_Gluconeogenesis
details
CFinderM000767transport,
transporter activity,
membrane,
acid phosphatase activity,
cysteine-type endopeptidase activity,
details
CFinderM000989cysteinyl-tRNA aminoacylation,
proton transport,
cysteine-tRNA ligase activity,
tRNA aminoacylation for protein translation,
Aminoacyl-tRNA_biosynthesis
Oxidative_phosphorylation
hydrogen-translocating pyrophosphatase activity,
details
CFinderM001035GT14 GlycosylTransferases
CAMTA Transcription_Regulator(from PlantTFDB)
microtubule,
protein complex,
RNA_degradation
Phagosome
details
CFinderM001238glycolysis,
fructose-bisphosphate aldolase activity,
Fructose_and_mannose_metabolism
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glycolysis_/_Gluconeogenesis
Pentose_phosphate_pathway
details
CFinderM001239DNA repair,
details
CFinderM001381CAMTA Transcription_Regulator(from PlantTFDB)
details
CFinderM001707glucose metabolic process,
valyl-tRNA aminoacylation,
negative_regulation_of_transcription,_DNA-templated
glucose-6-phosphate dehydrogenase activity,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Pentose_phosphate_pathway
Glutathione_metabolism
tRNA aminoacylation for protein translation,
details

4.Expression profilings


Show details about module gene expression profiling