CFinderM000115's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Dof Transcription_Regulator(from PlantTFDB)0.022165671GFam
AUX/IAA Transcription_Regulator(from iTAK)0.022165671GFam
C2C2-Dof Transcription_Regulator(from iTAK)0.022165671GFam
TKL-Pl-4 (from iTAK)0.022165671GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000051G1620Protein kinase superfamily proteinAT3G01490 (1.00E-145)
PH01000211G0640Dof-type zinc finger DNA-binding family proteinAT3G61850 (9.10E-38)
PH01000290G0630-AT5G56050 (7.50E-46)
PH01000340G0180Protein of unknown function (DUF581)AT3G22550 (3.60E-26)
PH01000722G0050PHD finger family proteinAT1G77800 (2.00E-110)
PH01000853G0770ATP-binding cassette 14AT1G31770 (5.30E-86)
PH01001068G0380ATP-binding cassette 14AT1G31770 (3.20E-44)
PH01002454G0130Phototropic-responsive NPH3 family proteinAT5G47800 (3.00E-137)
PH01003595G0090phytochrome-associated protein 2AT4G29080 (5.90E-55)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000058cysteamine dioxygenase activity,
LBD Transcription_Regulator(from PlantTFDB)
oxidation-reduction process,
Taurine_and_hypotaurine_metabolism
details
CFinderM000158G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
microtubule,
protein complex,
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
Phagosome
protein polymerization,
microtubule-based process,
DNA binding,
structural constituent of cytoskeleton,
chromatin binding,
details
CFinderM000162CAMTA Transcription_Regulator(from PlantTFDB)
AUX/IAA Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
C2C2-Dof Transcription_Regulator(from iTAK)
AGC_RSK-2 (from iTAK)
zinc_ion_transmembrane_transport
details
CFinderM000431Porphyrin_and_chlorophyll_metabolism
C2C2-Dof Transcription_Regulator(from iTAK)
HB-BELL Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
oxygen-dependent protoporphyrinogen oxidase activity,
details
CFinderM000679chromosome organization,
glucose metabolic process,
chromosome,
Glycolysis_/_Gluconeogenesis
details
CFinderM000989cysteinyl-tRNA aminoacylation,
proton transport,
cysteine-tRNA ligase activity,
tRNA aminoacylation for protein translation,
Aminoacyl-tRNA_biosynthesis
Oxidative_phosphorylation
hydrogen-translocating pyrophosphatase activity,
details
CFinderM001238glycolysis,
fructose-bisphosphate aldolase activity,
Fructose_and_mannose_metabolism
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glycolysis_/_Gluconeogenesis
Pentose_phosphate_pathway
details
CFinderM001707glucose metabolic process,
valyl-tRNA aminoacylation,
negative_regulation_of_transcription,_DNA-templated
glucose-6-phosphate dehydrogenase activity,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Pentose_phosphate_pathway
Glutathione_metabolism
tRNA aminoacylation for protein translation,
details

4.Expression profilings


Show details about module gene expression profiling