CFinderM000732's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SNF2 Transcription_Regulator(from iTAK)0.009155108GFam
transferase activity, transferring pentosyl groups,0.020382016GO:0016763
mRNA_surveillance_pathway0.021928485KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000002G0160-- (-)
PH01000380G0360-- (-)
PH01000394G0450Telomerase activating protein Est1AT5G19400 (4.00E-176)
PH01000490G0040plasmodesmata callose-binding protein 4AT1G69295 (1.70E-20)
PH01001067G0360SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-relatedAT1G50410 (0.00E+00)
PH01004030G0100initiator tRNA phosphoribosyl transferase family proteinAT2G40570 (1.00E-162)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000590Ribosome
translation,
structural constituent of ribosome,
SNF2 Transcription_Regulator(from iTAK)
intracellular,
RNA_degradation
details
CFinderM000729positive_regulation_of_transcription,_DNA-templated
GATA Transcription_Regulator(from PlantTFDB)
C2C2-GATA Transcription_Regulator(from iTAK)
TKL_CTR1-DRK-2 (from iTAK)
mRNA_surveillance_pathway
details
CFinderM000882GH35 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
details
CFinderM000977mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
defense response,
details
CFinderM001436STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
details
CFinderM001457mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
details
CFinderM001458mRNA_surveillance_pathway
AGC_RSK-2 (from iTAK)
SBP Transcription_Regulator(from PlantTFDB)
cell death,
details
CFinderM001525MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001628GH19 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
chitinase activity,
ER to Golgi vesicle-mediated transport,
chitin catabolic process,
cell wall macromolecule catabolic process,
details
CFinderM001729mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
transferase activity, transferring acyl groups,
details
CFinderM001785transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
details
CFinderM001819SNF2 Transcription_Regulator(from iTAK)
cis-Golgi network,
mRNA_surveillance_pathway
details
CFinderM001849SNF2 Transcription_Regulator(from iTAK)
mediator complex,
regulation of transcription from RNA polymerase II promoter,
details
CFinderM001870Basal_transcription_factors
SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
details

4.Expression profilings