CFinderM000950's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ER to Golgi vesicle-mediated transport,0.006459052GO:0006888
Mismatch_repair0.006459052KEGG
Golgi membrane,0.009785245GO:0000139
cis-Golgi network,0.009785245GO:0005801
SNARE_interactions_in_vesicular_transport0.024152708KEGG
Mismatch_repair0.024152708KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000180G0930Ribosomal protein S5/Elongation factor G/III/V family proteinAT1G06220 (0.00E+00)
PH01000975G0030RING/U-box superfamily proteinAT5G24870 (7.00E-35)
PH01001533G0120-AT5G25580 (6.30E-59)
PH01002275G0020golgi snare 11AT1G15880 (1.60E-82)
PH01002923G0140MUTS homolog 2AT3G18524 (1.00E-103)
PH01003955G0060Transducin/WD40 repeat-like superfamily proteinAT5G64630 (6.00E-159)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000320nicotinate phosphoribosyltransferase activity,
nicotinate-nucleotide diphosphorylase (carboxylating) activity,
adenylylsulfate_kinase_activity
nicotinate nucleotide salvage,
omega_peptidase_activity
SNARE_interactions_in_vesicular_transport
Nicotinate_and_nicotinamide_metabolism
Nitrogen_metabolism
sulfate assimilation,
NAD biosynthetic process,
nucleoside-triphosphatase activity,
metal ion transmembrane transporter activity,
ER to Golgi vesicle-mediated transport,
magnesium_ion_transport
transmembrane transport,
cis-Golgi network,
Golgi membrane,
details
CFinderM000568nuclear chromosome,
Mismatch_repair
Mismatch_repair
mRNA_surveillance_pathway
details
CFinderM000985nuclear mRNA splicing, via spliceosome,
RLK-Pelle_RLCK-XII-1 (from iTAK)
spliceosomal complex,
cis-Golgi network,
Golgi membrane,
lysine biosynthetic process via diaminopimelate,
ER to Golgi vesicle-mediated transport,
dihydrodipicolinate synthase activity,
snRNA_binding
SNARE_interactions_in_vesicular_transport
Lysine_biosynthesis
protein binding,
lyase activity,
details
CFinderM001646Tify Transcription_Regulator(from iTAK)
mRNA_catabolic_process
polyribonucleotide_nucleotidyltransferase_activity
3'-5'-exoribonuclease activity,
RNA processing,
details

4.Expression profilings