CFinderM001171's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
COPII_vesicle_coating0.005155766GO:0048208

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000004G2870nucleobase-ascorbate transporter 12AT2G27810 (0.00E+00)
PH01000083G0280RGPR-relatedAT5G47490 (0.00E+00)
PH01000243G0860-- (-)
PH01000564G0240-AT4G26450 (8.80E-16)
PH01002825G0080E2F target gene 1AT2G40550 (1.10E-48)
PH01005933G0010decoyAT1G14620 (6.20E-61)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000227Valine,_leucine_and_isoleucine_biosynthesis
COPII_vesicle_coating
intracellular,
translational elongation,
details
CFinderM000295translation,
AGC_RSK-2 (from iTAK)
CMGC_GSK (from iTAK)
Ribosome
intracellular,
protein phosphorylation,
details
CFinderM000439polygalacturonase activity,
nucleosome assembly,
details
CFinderM000558Whirly Transcription_Regulator(from PlantTFDB)
COPII_vesicle_coating
aminoacyl-tRNA hydrolase activity,
intracellular,
details
CFinderM000754Ribosome
outer membrane,
proteasome core complex, alpha-subunit complex,
structural constituent of ribosome,
threonine-type endopeptidase activity,
endopeptidase activity,
translation,
intracellular,
proteasome core complex,
Proteasome
proteolysis involved in cellular protein catabolic process,
details
CFinderM001109RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
details
CFinderM001428nuclear mRNA splicing, via spliceosome,
spliceosomal complex,
cell volume homeostasis,
COPII_vesicle_coating
lysine biosynthetic process via diaminopimelate,
chloride transport,
dihydrodipicolinate synthase activity,
snRNA_binding
Lysine_biosynthesis
details
CFinderM001680COPII_vesicle_coating
SET Transcription_Regulator(from iTAK)
potassium_ion_transmembrane_transport
details
CFinderM001805Golgi vesicle transport,
vesicle-mediated transport,
Spliceosome
details

4.Expression profilings