CFinderM001300's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
regulation of actin filament polymerization,0.019226548GO:0030833
HD-ZIP Transcription_Regulator(from PlantTFDB)0.023589304GFam
SBP Transcription_Regulator(from PlantTFDB)0.023589304GFam
HB-HD-ZIP Transcription_Regulator(from iTAK)0.023589304GFam
cytoskeleton,0.034805672GO:0005856
molybdenum ion binding,0.035712713GO:0030151

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000017G2520Homeobox-leucine zipper family protein / lipid-binding START domain-containing proteinAT5G60690 (0)
PH01000548G0610squamosa promoter binding protein-like 2AT5G43270 (5.60E-35)
PH01001744G0370Arp2/3 complex, 34 kD subunit p34-ArcAT1G30825 (8.40E-89)
PH01001830G0370nitrate reductase 1AT1G77760 (8.00E-102)
PH01003119G0190DNAJ heat shock N-terminal domain-containing proteinAT2G26890 (1.40E-27)
PH01003167G0090histone deacetylase 2BAT5G22650 (1.40E-10)
PH01004069G0090Sulfite exporter TauE/SafE family proteinAT2G25737 (2.00E-135)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000081chromosome, centromeric region,
GH17 Glycoside_Hydrolases
CBM43 Carbohydrate-Binding_Modules
mitosis,
details
CFinderM000264intrinsic to endoplasmic reticulum membrane,
GT22 GlycosylTransferases
HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-HD-ZIP Transcription_Regulator(from iTAK)
oxoglutarate dehydrogenase (succinyl-transferring) activity,
thiamine pyrophosphate binding,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Citrate_cycle_(TCA_cycle)
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
Lysine_degradation
Tryptophan_metabolism
carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
tricarboxylic acid cycle,
GPI anchor biosynthetic process,
details
CFinderM000603Spliceosome
details
CFinderM001156single-stranded DNA binding,
DNA_replication
details
CFinderM001301TALE Transcription_Regulator(from PlantTFDB)
SBP Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
glycogen biosynthetic process,
regulation of actin filament polymerization,
cytoskeleton,
details
CFinderM001877HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-BELL Transcription_Regulator(from iTAK)
HB-HD-ZIP Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
membrane,
details
CFinderM001884single-stranded DNA binding,
DNA_replication
RNA processing,
details

4.Expression profilings