CFinderM001547's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CMGC_CLK (from iTAK)0.001499508GFam
exosome_(RNase_complex)0.004687793GO:0000178
cell communication,0.018737988GO:0007154
RNA_degradation0.020270217KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000009G1380Pentatricopeptide repeat (PPR) superfamily proteinAT3G14730 (1.40E-95)
PH01000251G1070-AT4G30150 (2.80E-63)
PH01000356G0540Nucleic acid-binding, OB-fold-like proteinAT5G38890 (9.90E-37)
PH01000881G0350Phox (PX) domain-containing proteinAT3G48195 (5.00E-144)
PH01001560G0360ARM repeat superfamily proteinAT1G76390 (0.00E+00)
PH01002414G0090FUS3-complementing gene 1AT3G53570 (2.00E-179)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000196SCY1_SCYL2 (from iTAK)
phosphatidylinositol phosphorylation,
ubiquitin ligase complex,
protein ubiquitination,
binding,
details
CFinderM000204CMGC_CLK (from iTAK)
histone deacetylation,
ubiquitin ligase complex,
histone deacetylase activity,
details
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM000463exosome_(RNase_complex)
RNA_degradation
details
CFinderM000577COP9_signalosome
exosome_(RNase_complex)
cell communication,
RNA_degradation
phosphatidylinositol binding,
details
CFinderM000655cell communication,
details
CFinderM000692CMGC_CLK (from iTAK)
ornithine_metabolic_process
histone deacetylation,
ornithine carbamoyltransferase activity,
carboxyl- or carbamoyltransferase activity,
histone deacetylase activity,
Arginine_and_proline_metabolism
cellular amino acid metabolic process,
details
CFinderM001493ARID Transcription_Regulator(from iTAK)
magnesium_ion_transport
magnesium_ion_transmembrane_transporter_activity
details

4.Expression profilings