CFinderM001790's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
regulation of translational initiation,0.000562535GO:0006446
ribosome binding,0.020297901GO:0043022
eukaryotic translation initiation factor 3 complex,0.024710963GO:0005852
translation initiation factor activity,0.043571919GO:0003743

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000038G0790eukaryotic translation initiation factor 3KAT4G33250 (7.10E-91)
PH01000379G0610tetraspanin8AT2G23810 (7.40E-92)
PH01000497G0250TRICHOME BIREFRINGENCE-LIKE 24AT4G23790 (8.00E-115)
PH01001030G0210Pre-mRNA splicing Prp18-interacting factorAT1G65660 (5.00E-102)
PH01004447G0090-AT3G61800 (2.00E-118)
PH01004849G0060Calcium-dependent lipid-binding (CaLB domain) family proteinAT5G55530 (4.60E-94)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000111protein insertion into membrane,
ATP citrate synthase activity,
succinate-CoA ligase (ADP-forming) activity,
regulation_of_anion_transport
voltage-gated anion channel activity,
anion transport,
details
CFinderM001083MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Pseudo ARR-B Transcription_Regulator(from iTAK)
protein import into mitochondrial inner membrane,
transcription, DNA-dependent,
nucleus,
IWS1 Transcription_Regulator(from iTAK)
GNAT Transcription_Regulator(from iTAK)
details
CFinderM001134Lysine_biosynthesis
regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
spliceosomal complex,
Ribosome
details
CFinderM001269regulation of translational initiation,
'de novo' IMP biosynthetic process,
autophagy,
phosphoribosylformylglycinamidine cyclo-ligase activity,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
ribosome binding,
details
CFinderM001287cellular process,
homocysteine S-methyltransferase activity,
Cysteine_and_methionine_metabolism
details
CFinderM001329Endocytosis
selenium binding,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001330selenium binding,
dephosphorylation,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
Endocytosis
mRNA_surveillance_pathway
phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001471regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
WRKY Transcription_Regulator(from PlantTFDB)
details
CFinderM001703Endocytosis
regulation of ARF GTPase activity,
ARF GTPase activator activity,
details

4.Expression profilings