|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Valine,_leucine_and_isoleucine_degradation | 0.001031395 | KEGG | | Valine,_leucine_and_isoleucine_biosynthesis | 0.001031395 | KEGG | | Pantothenate_and_CoA_biosynthesis | 0.009949139 | KEGG | | branched chain family amino acid metabolic process, | 0.012841542 | GO:0009081 | | AGC_RSK-2 (from iTAK) | 0.014599651 | GFam | | RLK-Pelle_RLCK-VIIa-2 (from iTAK) | 0.017079744 | GFam | | iron-sulfur cluster assembly, | 0.02458028 | GO:0016226 | | branched-chain-amino-acid transaminase activity, | 0.028638378 | GO:0004084 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000094G0800 | - | - (-) | | PH01000393G0840 | Iron-sulphur cluster biosynthesis family protein | AT5G03905 (1.10E-35) | | PH01000724G0040 | Protein kinase superfamily protein | AT2G17220 (4.00E-132) | | PH01001442G0120 | branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) | AT5G65780 (6.00E-108) | | PH01001992G0080 | D6 protein kinase like 2 | AT5G47750 (0) | | PH01002028G0330 | B-S glucosidase 44 | AT3G18080 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000647 | RLK-Pelle_RLCK-VIIa-2 (from iTAK)
| details | | CFinderM000697 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
| details | | CFinderM001341 | RLK-Pelle_LRR-II (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
microtubule associated complex,
protein phosphorylation,
microtubule-based movement,
| details | | CFinderM001587 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
nucleoside_diphosphate_phosphorylation
branched chain family amino acid metabolic process,
CTP biosynthetic process,
GTP biosynthetic process,
UTP biosynthetic process,
nucleoside diphosphate kinase activity,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
| details | | CFinderM001591 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
metabolic process,
branched chain family amino acid metabolic process,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
branched-chain-amino-acid transaminase activity,
transferase activity, transferring pentosyl groups,
steroid biosynthetic process,
histidine biosynthetic process,
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
Pantothenate_and_CoA_biosynthesis
Histidine_metabolism
Steroid_biosynthesis
| details | | CFinderM001699 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
HB-other Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
sterol_24-C-methyltransferase_activity
5S rRNA binding,
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
Steroid_biosynthesis
steroid biosynthetic process,
branched chain family amino acid metabolic process,
ion transport,
| details | | CFinderM001708 | Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
| details | | CFinderM001757 | RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein phosphorylation,
| details | | CFinderM001843 | Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
PLATZ Transcription_Regulator(from iTAK)
protein complex,
microtubule,
TRAF Transcription_Regulator(from iTAK)
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
protein polymerization,
translational initiation,
microtubule-based process,
Pantothenate_and_CoA_biosynthesis
structural constituent of cytoskeleton,
| details | | CFinderM001880 | RNA_transport
C2H2 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
| details |
4.Expression profilings |
