Function module details

CFinderM000872's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
SWI/SNF-BAF60b Transcription_Regulator(from iTAK)	0.004803934	GFam
ER to Golgi vesicle-mediated transport,	0.021831969	GO:0006888
regulation_of_cell_cycle	0.021831969	GO:0051726
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity	0.024221386	GO:0000079
protein_kinase_binding	0.047958345	GO:0019901

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000106G1470	Cyclin A3;1	AT5G43080 (2.50E-41)
PH01000133G1360	Protein of unknown function (DUF1218)	AT5G49320 (1.10E-08)
PH01000196G0340	-	- (-)
PH01000297G0090	Mov34/MPN/PAD-1 family protein	AT1G80210 (1.10E-51)
PH01000332G0920	SNARE-like superfamily protein	AT2G20930 (4.80E-66)
PH01001246G0640	BSD domain-containing protein	AT1G69030 (1.70E-29)
PH01003297G0190	SWIB complex BAF60b domain-containing protein	AT3G19080 (1.70E-26)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000830	cytoskeleton, proton-transporting ATP synthase complex, catalytic core F(1), phagocytosis, branched chain family amino acid biosynthetic process, signal peptide processing, phosphoacetylglucosamine mutase activity, Other_glycan_degradation	details
CFinderM000831	ER_membrane_protein_complex Protein_export branched chain family amino acid biosynthetic process, signal peptide processing, dephosphorylation, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, acetolactate synthase activity, peptidase activity, phosphatase activity, protein dephosphorylation,	details
CFinderM001286	GH31 Glycoside_Hydrolases ER_membrane_protein_complex phosphoacetylglucosamine mutase activity, RLK-Pelle_RLCK-VIIa-2 (from iTAK)	details

4.Expression profilings