CFinderM000830's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cytoskeleton,0.037152363GO:0005856
proton-transporting ATP synthase complex, catalytic core F(1),0.037152363GO:0045261
phagocytosis,0.042406369GO:0006909
branched chain family amino acid biosynthetic process,0.042406369GO:0009082
signal peptide processing,0.042406369GO:0006465
phosphoacetylglucosamine mutase activity,0.046649473GO:0004610
Other_glycan_degradation0.046759441KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000023G1110N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily proteinAT5G61540 (1.90E-90)
PH01000196G0340-- (-)
PH01000414G0910Leucine-rich repeat protein kinase family proteinAT1G04210 (8.20E-51)
PH01000468G0690ELMO/CED-12 family proteinAT3G03610 (1.30E-39)
PH01000648G0190Phosphatidic acid phosphatase (PAP2) family proteinAT5G03080 (1.40E-83)
PH01000680G0700mitogen-activated protein kinase phosphatase 1AT3G55270 (1.00E-173)
PH01000860G0510-- (-)
PH01000881G0370-- (-)
PH01001246G0640BSD domain-containing proteinAT1G69030 (1.70E-29)
PH01001513G0460ATP synthase alpha/beta family proteinAT5G08690 (9.70E-99)
PH01001563G0290Peptidase S24/S26A/S26B/S26C family proteinAT1G52600 (5.30E-74)
PH01002642G0020-- (-)
PH01003380G0040phosphoglucosamine mutase-relatedAT5G18070 (1.70E-27)
PH01004647G0040ACT domain-containing small subunit of acetolactate synthase proteinAT2G31810 (1.50E-82)
PH01005033G0090-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000400hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
details
CFinderM000401cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM000758protein homooligomerization,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
phosphatase activity,
dephosphorylation,
protein dephosphorylation,
details
CFinderM000831ER_membrane_protein_complex
Protein_export
branched chain family amino acid biosynthetic process,
signal peptide processing,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
acetolactate synthase activity,
peptidase activity,
phosphatase activity,
protein dephosphorylation,
details
CFinderM000872SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
ER to Golgi vesicle-mediated transport,
regulation_of_cell_cycle
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
protein_kinase_binding
details
CFinderM001093Rcd1-like Transcription_Regulator(from iTAK)
phagocytosis,
cytoskeleton,
protein dephosphorylation,
protein serine/threonine phosphatase activity,
details
CFinderM001178WASH_complex
eukaryotic translation elongation factor 1 complex,
phagocytosis,
cytoskeleton,
nucleoside-triphosphatase activity,
translational elongation,
translation elongation factor activity,
nucleotide binding,
details
CFinderM001286GH31 Glycoside_Hydrolases
ER_membrane_protein_complex
phosphoacetylglucosamine mutase activity,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
details
CFinderM001349hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
cation-transporting_ATPase_activity
cation transport,
details
CFinderM001599N-Glycan_biosynthesis
membrane,
details
CFinderM001726methyltransferase activity,
fucosyltransferase_activity
DNA methylation,
protein methylation,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
membrane,
protein glycosylation,
details

4.Expression profilings


Show details about module gene expression profiling