CFinderM000898's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
WASH_complex0.005060443GO:0071203
cullin-RING ubiquitin ligase complex,0.007579996GO:0031461
PHD Transcription_Regulator(from iTAK)0.008224126GFam
mitotic_spindle_assembly_checkpoint0.009373388GO:0007094
ubiquitin protein ligase binding,0.048506913GO:0031625
cysteine-type peptidase activity,0.048506913GO:0008234
protein serine/threonine phosphatase activity,0.048506913GO:0004722

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G3240PHD finger family proteinAT3G08020 (1.00E-153)
PH01000040G1360Protein phosphatase 2C family proteinAT3G17090 (7.40E-65)
PH01000105G0750Cysteine proteinases superfamily proteinAT1G10570 (7.90E-37)
PH01000317G1200mitotic checkpoint family proteinAT5G49880 (1.70E-79)
PH01000863G0580cullin 1AT4G02570 (4.20E-71)
PH01001075G0520-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000733TBP-class_protein_binding
positive_regulation_of_transcription,_DNA-templated
WASH_complex
outer membrane,
transcription initiation, DNA-dependent,
zinc ion binding,
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM000760CMGC_CLK (from iTAK)
cullin-RING ubiquitin ligase complex,
cytoplasm,
SET Transcription_Regulator(from iTAK)
details
CFinderM001015DNA primase activity,
details
CFinderM001093Rcd1-like Transcription_Regulator(from iTAK)
phagocytosis,
cytoskeleton,
protein dephosphorylation,
protein serine/threonine phosphatase activity,
details
CFinderM001242mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001360cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001424WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
details
CFinderM001581WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
details
CFinderM001674PHD Transcription_Regulator(from iTAK)
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity,
pentose-phosphate shunt,
details
CFinderM001679PHD Transcription_Regulator(from iTAK)
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
nucleotidyltransferase activity,
serine-type carboxypeptidase activity,
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
details
CFinderM001830WASH_complex
drug_binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
details

4.Expression profilings