CFinderM001654's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
WNK_NRBP (from iTAK)0.002248559GFam
RNA_transport0.029453253KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000051G1670Uncharacterised protein family (UPF0497)AT2G36330 (9.90E-14)
PH01000055G1160-AT4G39690 (1.10E-97)
PH01000558G0510Translation initiation factor SUI1 family proteinAT1G54290 (3.40E-30)
PH01000845G0520Major facilitator superfamily proteinAT1G22540 (1.00E-53)
PH01002071G0310with no lysine (K) kinase 6AT3G18750 (2.00E-146)
PH01003429G0150-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000611WNK_NRBP (from iTAK)
PHD Transcription_Regulator(from iTAK)
details
CFinderM000857RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATP biosynthetic process,
ATP_catabolic_process
nitrogen compound metabolic process,
Oxidative_phosphorylation
details
CFinderM001055NF-YB Transcription_Regulator(from PlantTFDB)
details
CFinderM001241translational initiation,
RNA_transport
details
CFinderM001342details
CFinderM001377C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001449WNK_NRBP (from iTAK)
CAMK_CAMKL-CHK1 (from iTAK)
details
CFinderM001509Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
Ribosome
nuclear pore,
fatty acid metabolic process,
translation,
DNA integration,
3-hydroxyacyl-CoA_dehydrogenase_activity
details
CFinderM001532GT1 GlycosylTransferases
sucrose-phosphate synthase activity,
lipid glycosylation,
positive_regulation_of_transcription,_DNA-templated
cis-Golgi network,
thylakoid,
transcription initiation from RNA polymerase II promoter,
fructose_6-phosphate_metabolic_process
photosystem I,
6-phosphofructokinase complex,
sucrose metabolic process,
details
CFinderM001534DNA integration,
translation,
nuclear pore,
large ribosomal subunit,
glycerol ether metabolic process,
details
CFinderM001541Terpenoid_backbone_biosynthesis
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
terpenoid biosynthetic process,
iron-sulfur cluster assembly,
details
CFinderM001653WNK_NRBP (from iTAK)
RNA_transport
details
CFinderM001743details
CFinderM001822protein processing,
PHD Transcription_Regulator(from iTAK)
details
CFinderM001847peptide-methionine_(R)-S-oxide_reductase_activity
binding,
metallopeptidase activity,
details
CFinderM001857protein processing,
antioxidant activity,
peroxiredoxin activity,
details

4.Expression profilings