|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | peptide-methionine_(R)-S-oxide_reductase_activity | 0.010934765 | GO:0033743 | | binding, | 0.011961207 | GO:0005488 | | metallopeptidase activity, | 0.011961207 | GO:0008237 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000611 | WNK_NRBP (from iTAK)
PHD Transcription_Regulator(from iTAK)
| details | | CFinderM000994 | aminoacyl-tRNA_editing_activity
metallopeptidase activity,
| details | | CFinderM001028 | peptide-methionine_(R)-S-oxide_reductase_activity
metallopeptidase activity,
Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
| details | | CFinderM001055 | NF-YB Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001449 | WNK_NRBP (from iTAK)
CAMK_CAMKL-CHK1 (from iTAK)
| details | | CFinderM001509 | Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
Ribosome
nuclear pore,
fatty acid metabolic process,
translation,
DNA integration,
3-hydroxyacyl-CoA_dehydrogenase_activity
| details | | CFinderM001532 | GT1 GlycosylTransferases
sucrose-phosphate synthase activity,
lipid glycosylation,
positive_regulation_of_transcription,_DNA-templated
cis-Golgi network,
thylakoid,
transcription initiation from RNA polymerase II promoter,
fructose_6-phosphate_metabolic_process
photosystem I,
6-phosphofructokinase complex,
sucrose metabolic process,
| details | | CFinderM001534 | DNA integration,
translation,
nuclear pore,
large ribosomal subunit,
glycerol ether metabolic process,
| details | | CFinderM001543 | SET Transcription_Regulator(from iTAK)
histone_lysine_methylation
histone-lysine N-methyltransferase activity,
Lysine_degradation
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
histone_methylation
(1->3)-beta-D-glucan biosynthetic process,
cellular protein modification process,
histone_binding
1,3-beta-D-glucan synthase complex,
nucleus,
1,3-beta-D-glucan synthase activity,
| details | | CFinderM001654 | WNK_NRBP (from iTAK)
RNA_transport
| details | | CFinderM001743 | | details | | CFinderM001759 | Citrate_cycle_(TCA_cycle)
tricarboxylic acid cycle enzyme complex,
phenylalanyl-tRNA aminoacylation,
fumarate metabolic process,
tricarboxylic acid cycle,
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
fumarate hydratase activity,
tRNA binding,
Carbon_fixation_pathways_in_prokaryotes
Aminoacyl-tRNA_biosynthesis
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
| details | | CFinderM001760 | Citrate_cycle_(TCA_cycle)
oxoglutarate dehydrogenase complex,
transferase activity, transferring acyl groups,
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
dihydrolipoyllysine-residue succinyltransferase activity,
tricarboxylic acid cycle,
electron transport chain,
cellular protein modification process,
Lysine_degradation
| details | | CFinderM001787 | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
cellular protein modification process,
binding,
| details | | CFinderM001822 | protein processing,
PHD Transcription_Regulator(from iTAK)
| details | | CFinderM001824 | rRNA modification,
rRNA methyltransferase activity,
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
tRNA aminoacylation,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA aminoacylation for protein translation,
| details | | CFinderM001846 | rRNA modification,
rRNA methyltransferase activity,
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
tRNA aminoacylation,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA aminoacylation for protein translation,
| details | | CFinderM001857 | protein processing,
antioxidant activity,
peroxiredoxin activity,
| details | | CFinderM001887 | microtubule organizing center,
spindle pole,
nuclear pore,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
RNA_transport
| details | | CFinderM001892 | phenylalanyl-tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
WRKY Transcription_Regulator(from PlantTFDB)
tRNA binding,
| details |
4.Expression profilings |
