CFinderM001760's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Citrate_cycle_(TCA_cycle)3.41E-06KEGG
oxoglutarate dehydrogenase complex,0.000749953GO:0045252
transferase activity, transferring acyl groups,0.003096745GO:0016746
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,0.01377821GO:0004719
dihydrolipoyllysine-residue succinyltransferase activity,0.01377821GO:0004149
tricarboxylic acid cycle,0.036956054GO:0006099
electron transport chain,0.036956054GO:0022900
cellular protein modification process,0.036956054GO:0006464
Lysine_degradation0.045519202KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000005G2110RNAse l inhibitor protein 2AT4G19210 (0.00E+00)
PH01000016G0530Dihydrolipoamide succinyltransferaseAT5G55070 (9.00E-158)
PH01000307G0680negative regulator of systemic acquired resistance (SNI1)AT4G18470 (3.10E-42)
PH01000476G0050protein phosphatase 2A subunit A2AT3G25800 (0.00E+00)
PH01000509G0360protein-l-isoaspartate methyltransferase 1AT3G48330 (7.60E-88)
PH01000589G0690succinate dehydrogenase 1-1AT5G66760 (0.00E+00)
PH01000748G0550-- (-)
PH01002702G0180Dihydrolipoamide acetyltransferase, long form proteinAT3G52200 (5.40E-92)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000697Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
details
CFinderM001054seryl-tRNA aminoacylation,
electron transport chain,
bZIP Transcription_Regulator(from PlantTFDB)
serine-tRNA ligase activity,
RNA metabolic process,
details
CFinderM001055NF-YB Transcription_Regulator(from PlantTFDB)
details
CFinderM001543SET Transcription_Regulator(from iTAK)
histone_lysine_methylation
histone-lysine N-methyltransferase activity,
Lysine_degradation
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
histone_methylation
(1->3)-beta-D-glucan biosynthetic process,
cellular protein modification process,
histone_binding
1,3-beta-D-glucan synthase complex,
nucleus,
1,3-beta-D-glucan synthase activity,
details
CFinderM001759Citrate_cycle_(TCA_cycle)
tricarboxylic acid cycle enzyme complex,
phenylalanyl-tRNA aminoacylation,
fumarate metabolic process,
tricarboxylic acid cycle,
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
fumarate hydratase activity,
tRNA binding,
Carbon_fixation_pathways_in_prokaryotes
Aminoacyl-tRNA_biosynthesis
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
details
CFinderM001787protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
cellular protein modification process,
binding,
details
CFinderM001847peptide-methionine_(R)-S-oxide_reductase_activity
binding,
metallopeptidase activity,
details

4.Expression profilings