CFinderM001798's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
proton-transporting V-type ATPase, V0 domain,0.005617883GO:0033179
proton-transporting two-sector ATPase complex, proton-transporting domain,0.005617883GO:0033177
ATP hydrolysis coupled proton transport,0.007665186GO:0015991
Phagosome0.035928121KEGG
Oxidative_phosphorylation0.035928121KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000206G0390prenylated RAB acceptor 1.B4AT2G38360 (1.90E-40)
PH01001817G0340SMAD/FHA domain-containing protein AT5G47790 (3.00E-116)
PH01003031G0040-- (-)
PH01004633G0020Protein of unknown function (DUF1336)AT5G10750 (1.60E-89)
PH01005541G0030ATPase, F0/V0 complex, subunit C proteinAT1G19910 (5.30E-60)
PH01051075G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000705HB-other Transcription_Regulator(from PlantTFDB)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM000938proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
binding,
mRNA_surveillance_pathway
hydrogen ion transmembrane transporter activity,
ATP hydrolysis coupled proton transport,
TORC1_complex
Phagosome
Oxidative_phosphorylation
phosphotransferase activity, alcohol group as acceptor,
TOR_signaling
rRNA_catabolic_process
details
CFinderM001390dTMP biosynthetic process,
dihydrofolate reductase activity,
thymidylate synthase activity,
mRNA_surveillance_pathway
details
CFinderM001554protein retention in ER lumen,
ER retention sequence binding,
peptidyl-prolyl cis-trans isomerase activity,
acid-amino acid ligase activity,
details
CFinderM001580iron-sulfur cluster assembly,
RNA processing,
details
CFinderM001609RNA_transport
mRNA_surveillance_pathway
details
CFinderM001678mRNA_cleavage_and_polyadenylation_specificity_factor_complex
mRNA cleavage,
protein retention in ER lumen,
mRNA_polyadenylation
RNA metabolic process,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
ER retention sequence binding,
details
CFinderM001694TKL_CTR1-DRK-2 (from iTAK)
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
cytochrome-c oxidase activity,
histone acetyltransferase activity,
transcription cofactor activity,
details
CFinderM001711intracellular protein transport,
binding,
details
CFinderM001777Ubiquitin_mediated_proteolysis
protein folding,
details
CFinderM001796HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001797proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
mediator complex,
regulation of transcription from RNA polymerase II promoter,
ATP hydrolysis coupled proton transport,
MYB-related Transcription_Regulator(from iTAK)
RNA_polymerase_II_transcription_cofactor_activity
hydrogen ion transmembrane transporter activity,
Phagosome
Oxidative_phosphorylation
details
CFinderM001865mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
cytochrome-c oxidase activity,
Oxidative_phosphorylation
details

4.Expression profilings