CFinderM000202's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
peroxiredoxin activity,0.016640632GO:0051920
antioxidant activity,0.016640632GO:0016209
RNA_degradation0.023608047KEGG
GRAS Transcription_Regulator(from PlantTFDB)0.038440382GFam
MYB_related Transcription_Regulator(from PlantTFDB)0.038440382GFam
MYB-related Transcription_Regulator(from iTAK)0.038440382GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000200G0090-- (-)
PH01000287G0950-AT1G62520 (4.10E-36)
PH01001099G0510Homeodomain-like transcriptional regulatorAT5G58900 (1.30E-26)
PH01002448G01502-cysteine peroxiredoxin BAT5G06290 (7.00E-107)
PH01004823G0070GRAS family transcription factor family proteinAT1G14920 (5.40E-44)
PH01005592G0050DegP protease 10AT5G36950 (5.30E-55)
PH01006233G0050Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domainAT2G32415 (2.00E-160)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000355OFP Transcription_Regulator(from iTAK)
electron transport chain,
RNA_degradation
Photosynthesis
details
CFinderM000357RNA_degradation
steroid biosynthetic process,
S-adenosylmethionine-dependent methyltransferase activity,
details
CFinderM000509Whirly Transcription_Regulator(from PlantTFDB)
protochlorophyllide reductase activity,
Photosynthesis
Porphyrin_and_chlorophyll_metabolism
photosystem II,
oxygen evolving complex,
RNA_degradation
details
CFinderM000510Porphyrin_and_chlorophyll_metabolism
protochlorophyllide reductase activity,
glutamate-1-semialdehyde 2,1-aminomutase activity,
tetrapyrrole biosynthetic process,
sodium ion transport,
RNA_degradation
details
CFinderM000775Ribosome
iron_ion_transmembrane_transport
translation,
iron ion transmembrane transporter activity,
structural constituent of ribosome,
intracellular,
RNA_degradation
details
CFinderM000982RNA_degradation
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
cullin-RING ubiquitin ligase complex,
details
CFinderM001222aminoacylase activity,
RNA_degradation
details
CFinderM001489Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
RNA_degradation
details
CFinderM001576RNA_degradation
photosystem II,
extrinsic to membrane,
oxygen evolving complex,
details
CFinderM001813GT48 GlycosylTransferases
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
1,3-beta-D-glucan synthase complex,
S-adenosylmethionine-dependent methyltransferase activity,
cytochrome-c oxidase activity,
steroid biosynthetic process,
(1->3)-beta-D-glucan biosynthetic process,
metabolic process,
RNA_degradation
Oxidative_phosphorylation
cellular metabolic process,
details
CFinderM001864GH63 Glycoside_Hydrolases
oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
oxygen evolving complex,
photosystem II,
extrinsic to membrane,
Photosynthesis
details

4.Expression profilings