CFinderM000775's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ribosome0.007231266KEGG
iron_ion_transmembrane_transport0.012495117GO:0034755
translation,0.01606053GO:0006412
iron ion transmembrane transporter activity,0.022041386GO:0005381
structural constituent of ribosome,0.028330774GO:0003735
intracellular,0.036442898GO:0005622
RNA_degradation0.040401603KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000061G1290-- (-)
PH01000122G1060Ribosomal protein L17 family proteinAT3G54210 (4.00E-60)
PH01000746G0330Ribosomal protein L13 family proteinAT1G78630 (5.50E-76)
PH01001111G0180cytochrome c biogenesis protein familyAT1G49380 (3.00E-08)
PH01001494G0270UDP-glucosyl transferase 88A1AT3G16520 (1.90E-51)
PH01001522G0130-AT3G04550 (6.90E-45)
PH01001782G0440iron-regulated protein 3AT5G26820 (1.00E-113)
PH01006233G0050Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domainAT2G32415 (2.00E-160)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000202peroxiredoxin activity,
antioxidant activity,
RNA_degradation
GRAS Transcription_Regulator(from PlantTFDB)
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000355OFP Transcription_Regulator(from iTAK)
electron transport chain,
RNA_degradation
Photosynthesis
details
CFinderM000357RNA_degradation
steroid biosynthetic process,
S-adenosylmethionine-dependent methyltransferase activity,
details
CFinderM000419RLK-Pelle_LRR-Xa (from iTAK)
Ribosome
Ribosome
translation,
rRNA processing,
structural constituent of ribosome,
details
CFinderM000509Whirly Transcription_Regulator(from PlantTFDB)
protochlorophyllide reductase activity,
Photosynthesis
Porphyrin_and_chlorophyll_metabolism
photosystem II,
oxygen evolving complex,
RNA_degradation
details
CFinderM000510Porphyrin_and_chlorophyll_metabolism
protochlorophyllide reductase activity,
glutamate-1-semialdehyde 2,1-aminomutase activity,
tetrapyrrole biosynthetic process,
sodium ion transport,
RNA_degradation
details
CFinderM000982RNA_degradation
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
cullin-RING ubiquitin ligase complex,
details
CFinderM001222aminoacylase activity,
RNA_degradation
details
CFinderM001489Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
RNA_degradation
details
CFinderM001576RNA_degradation
photosystem II,
extrinsic to membrane,
oxygen evolving complex,
details
CFinderM001813GT48 GlycosylTransferases
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
1,3-beta-D-glucan synthase complex,
S-adenosylmethionine-dependent methyltransferase activity,
cytochrome-c oxidase activity,
steroid biosynthetic process,
(1->3)-beta-D-glucan biosynthetic process,
metabolic process,
RNA_degradation
Oxidative_phosphorylation
cellular metabolic process,
details
CFinderM001864GH63 Glycoside_Hydrolases
oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
oxygen evolving complex,
photosystem II,
extrinsic to membrane,
Photosynthesis
details

4.Expression profilings